|
ID |
Name |
Source |
pValue |
FDR B&H |
FDR B&Y |
Bonferroni |
Genes from Input
|
Genes in Annotation
|
1
|
15665281-Table2
|
Human Brain Wong05 96genes
|
GeneSigDB
|
1.286E-6
|
1.244E-3
|
9.269E-3
|
1.244E-3
|
3
|
67
|
2
|
17823238-TableS5
|
Human EmbryonicStemCell Soh07 469genes
|
GeneSigDB
|
1.031E-5
|
4.984E-3
|
3.714E-2
|
9.968E-3
|
4
|
462
|
3
|
M3781
|
Genes down-regulated in comparison of control dendritic cells (DC) at 4 h versus those stimulated with Gardiquimod (TLR7 agonist) at 4 h.
|
MSigDB C7: Immunologic Signatures (v6.0)
|
3.451E-5
|
1.112E-2
|
8.290E-2
|
3.337E-2
|
3
|
200
|
4
|
17363501-Table2
|
Human pancreas Jimeno07 39genes
|
GeneSigDB
|
6.552E-5
|
1.339E-2
|
9.981E-2
|
6.336E-2
|
2
|
36
|
5
|
M12802
|
Genes from the recurrent amplicons in 89 samples of oral squamous cell carcinoma (SCC).
|
MSigDB C2: CGP Curated Gene Sets (v6.0)
|
6.925E-5
|
1.339E-2
|
9.981E-2
|
6.697E-2
|
2
|
37
|
6
|
M15476
|
Genes up-regulated in primary adipocytes compared to preadipocytes.
|
MSigDB C2: CGP Curated Gene Sets (v6.0)
|
2.791E-4
|
3.741E-2
|
2.788E-1
|
2.699E-1
|
2
|
74
|
7
|
16024625-Table1
|
Human Colon Craene05 85genes
|
GeneSigDB
|
2.791E-4
|
3.741E-2
|
2.788E-1
|
2.699E-1
|
2
|
74
|
8
|
16488994-SuppTable1b
|
Mouse Lung Lu06 856genes Array MEO430Av2
|
GeneSigDB
|
3.635E-4
|
3.741E-2
|
2.788E-1
|
3.515E-1
|
3
|
443
|
9
|
16488994-SuppTable1a
|
Mouse Lung Lu06 856genes Array MG U74Av2
|
GeneSigDB
|
3.781E-4
|
3.741E-2
|
2.788E-1
|
3.656E-1
|
3
|
449
|
10
|
12917485-Table6
|
Human Breast Sotiriou03 606genes ER
|
GeneSigDB
|
3.931E-4
|
3.741E-2
|
2.788E-1
|
3.801E-1
|
3
|
455
|
11
|
M15382
|
Genes up-regulated in primary fibroblast cell culture after infection with HCMV (AD169 strain) at 10 h time point that were not up-regulated at the previous time point, 8 h.
|
MSigDB C2: CGP Curated Gene Sets (v6.0)
|
5.091E-4
|
3.741E-2
|
2.788E-1
|
4.923E-1
|
2
|
100
|
12
|
M4925
|
Up-regulated genes classifying non-tumor lung tissues by age after incution of lung cancer by urethane injection [PubChem=5641]: early (24-26 weeks) vs late (46 weeks).
|
MSigDB C2: CGP Curated Gene Sets (v6.0)
|
7.937E-4
|
3.741E-2
|
2.788E-1
|
7.675E-1
|
2
|
125
|
13
|
16024625-SuppTable2a
|
Human Colon Craene05 185genes
|
GeneSigDB
|
8.064E-4
|
3.741E-2
|
2.788E-1
|
7.797E-1
|
2
|
126
|
14
|
11988840-Table1
|
Human Breast Oh02 170genes
|
GeneSigDB
|
9.112E-4
|
3.741E-2
|
2.788E-1
|
8.811E-1
|
2
|
134
|
15
|
M9446
|
Genes up-regulated in splenocytes: control versus infected with Sendai virus.
|
MSigDB C7: Immunologic Signatures (v6.0)
|
1.263E-3
|
3.741E-2
|
2.788E-1
|
1.000E0
|
2
|
158
|
16
|
M8242
|
Genes down-regulated in polarizing CD4 [GeneID=920] Th17 cells: wildtype versus RORC [GeneID=6097] knockout.
|
MSigDB C7: Immunologic Signatures (v6.0)
|
1.409E-3
|
3.741E-2
|
2.788E-1
|
1.000E0
|
2
|
167
|
17
|
M6323
|
Genes up-regulated in spleen from DUSP1 [GeneID=1843] knockout: control versus LPS.
|
MSigDB C7: Immunologic Signatures (v6.0)
|
1.563E-3
|
3.741E-2
|
2.788E-1
|
1.000E0
|
2
|
176
|
18
|
M7008
|
Genes up-regulated in megakaryo-erythrocyte progenitors versus granulo-monocyte progenitors.
|
MSigDB C7: Immunologic Signatures (v6.0)
|
1.599E-3
|
3.741E-2
|
2.788E-1
|
1.000E0
|
2
|
178
|
19
|
M2787
|
Genes up-regulated upon knockdown of PTEN [Gene ID=5728] by RNAi.
|
MSigDB C6: Oncogenic Signatures (v6.0)
|
1.799E-3
|
3.741E-2
|
2.788E-1
|
1.000E0
|
2
|
189
|
20
|
M2675
|
Genes down-regulated in HUVEC cells (endothelium) by treatment with VEGFA [Gene ID=7422].
|
MSigDB C6: Oncogenic Signatures (v6.0)
|
1.875E-3
|
3.741E-2
|
2.788E-1
|
1.000E0
|
2
|
193
|
21
|
M8287
|
Genes up-regulated in B lymphocytes from: peritoneal cavity versus spleen.
|
MSigDB C7: Immunologic Signatures (v6.0)
|
1.914E-3
|
3.741E-2
|
2.788E-1
|
1.000E0
|
2
|
195
|
22
|
M4959
|
Genes down-regulated in comparison of B cells from influenza vaccinee at day 7 post-vaccination versus plasmacytoid dendritic cells (pDC) at day 7 post-vaccination.
|
MSigDB C7: Immunologic Signatures (v6.0)
|
1.992E-3
|
3.741E-2
|
2.788E-1
|
1.000E0
|
2
|
199
|
23
|
M8361
|
Genes up-regulated in T reg: natural versus induced cells.
|
MSigDB C7: Immunologic Signatures (v6.0)
|
1.992E-3
|
3.741E-2
|
2.788E-1
|
1.000E0
|
2
|
199
|
24
|
M4374
|
Genes up-regulated in comparison of lung tissue from wild type mice subjected to ozone for 0 h versus that from TLR4 [GeneID=7099] deficient mice subjected to ozone for 24 h.
|
MSigDB C7: Immunologic Signatures (v6.0)
|
1.992E-3
|
3.741E-2
|
2.788E-1
|
1.000E0
|
2
|
199
|
25
|
M4942
|
Genes down-regulated in comparison of B cells versus plasmacytoid dendritic cells (pDC) .
|
MSigDB C7: Immunologic Signatures (v6.0)
|
1.992E-3
|
3.741E-2
|
2.788E-1
|
1.000E0
|
2
|
199
|
26
|
M8357
|
Genes up-regulated in atherosclerosis macrophages: anti miR-33 versus anti miR.
|
MSigDB C7: Immunologic Signatures (v6.0)
|
2.012E-3
|
3.741E-2
|
2.788E-1
|
1.000E0
|
2
|
200
|
27
|
M3217
|
Genes up-regulated in comparison of CD4 [GeneID=920] T cells activated with lamina propria dendritic cells versus regulatory T cell (Treg).
|
MSigDB C7: Immunologic Signatures (v6.0)
|
2.012E-3
|
3.741E-2
|
2.788E-1
|
1.000E0
|
2
|
200
|
28
|
M3760
|
Genes down-regulated in comparison of control dendritic cells (DC) at 2 h versus those stimulated with CpG DNA (TLR9 agonist) at 2 h.
|
MSigDB C7: Immunologic Signatures (v6.0)
|
2.012E-3
|
3.741E-2
|
2.788E-1
|
1.000E0
|
2
|
200
|
29
|
M8367
|
Genes down-regulated in T reg from: peripheral blood versus cord blood.
|
MSigDB C7: Immunologic Signatures (v6.0)
|
2.012E-3
|
3.741E-2
|
2.788E-1
|
1.000E0
|
2
|
200
|
30
|
M6609
|
Genes up-regulated in bone marrow-derived macrophage (45 min): LPS versus IL10 [GeneID=3586] and LPS.
|
MSigDB C7: Immunologic Signatures (v6.0)
|
2.012E-3
|
3.741E-2
|
2.788E-1
|
1.000E0
|
2
|
200
|
31
|
M8468
|
Genes up-regulated in activated CD4 [GeneID=920] T cells with MIR17 [GeneID=406952] perturbation: knockout versus over-expression.
|
MSigDB C7: Immunologic Signatures (v6.0)
|
2.012E-3
|
3.741E-2
|
2.788E-1
|
1.000E0
|
2
|
200
|
32
|
M9662
|
Genes down-regulated in CD4 [GeneID=920] T helper cells Th0: 1h versus 20h.
|
MSigDB C7: Immunologic Signatures (v6.0)
|
2.012E-3
|
3.741E-2
|
2.788E-1
|
1.000E0
|
2
|
200
|
33
|
M9076
|
Genes up-regulated in memory CD8 T cells: ITGAE- [GeneID=3682] from spleen versus ITGAE+ [GeneID=3682] from brain.
|
MSigDB C7: Immunologic Signatures (v6.0)
|
2.012E-3
|
3.741E-2
|
2.788E-1
|
1.000E0
|
2
|
200
|
34
|
M8982
|
Genes down-regulated in CD4 [GeneID=920] T cells over-expressing FOXP3 [GeneID=50943] and PPARg1 form of PPARG [GeneID=5468]: untreated versus pioglitazone [PubChem=4829].
|
MSigDB C7: Immunologic Signatures (v6.0)
|
2.012E-3
|
3.741E-2
|
2.788E-1
|
1.000E0
|
2
|
200
|
35
|
M5838
|
Genes up-regulated in comparison of exhausted CD8 T cells versus memory CD8 T cells.
|
MSigDB C7: Immunologic Signatures (v6.0)
|
2.012E-3
|
3.741E-2
|
2.788E-1
|
1.000E0
|
2
|
200
|
36
|
M4895
|
Genes up-regulated in comparison of primary splenic B cells from wild type mice versus those from Xid mice.
|
MSigDB C7: Immunologic Signatures (v6.0)
|
2.012E-3
|
3.741E-2
|
2.788E-1
|
1.000E0
|
2
|
200
|
37
|
M3688
|
Genes down-regulated in comparison of control dendritic cells (DC) at 2 h versus those stimulated with LPS (TLR4 agonist) at 2 h.
|
MSigDB C7: Immunologic Signatures (v6.0)
|
2.012E-3
|
3.741E-2
|
2.788E-1
|
1.000E0
|
2
|
200
|
38
|
M3629
|
Genes up-regulated in comparison of unstimulated CD8 T cells at 48 h versus CD8 T cells at 48 h after stimulation with IL12.
|
MSigDB C7: Immunologic Signatures (v6.0)
|
2.012E-3
|
3.741E-2
|
2.788E-1
|
1.000E0
|
2
|
200
|
39
|
M3823
|
Genes down-regulated in comparison of dendritic cells (DC) stimulated with poly(I:C) (TLR3 agonist) at 0.5 h versus DC cells stimulated with Pam3Csk4 (TLR1/2 agonist) at 0.5 h.
|
MSigDB C7: Immunologic Signatures (v6.0)
|
2.012E-3
|
3.741E-2
|
2.788E-1
|
1.000E0
|
2
|
200
|
40
|
M6655
|
Genes up-regulated in bone marrow-derived macrophages at 45 min of stimulation by IL10 [GeneID=3486] and LPS: IL6 [GeneID=3469] knockout versus IL10 [GeneID=3486] knockout.
|
MSigDB C7: Immunologic Signatures (v6.0)
|
2.012E-3
|
3.741E-2
|
2.788E-1
|
1.000E0
|
2
|
200
|
41
|
M3957
|
Genes up-regulated in comparison of dendritic cells (DC) stimulated with Pam3Csk4 (TLR1/2 agonist) at 0.5 h versus DC cells stimulated with Gardiquimod (TLR7 agonist) at 0.5 h.
|
MSigDB C7: Immunologic Signatures (v6.0)
|
2.012E-3
|
3.741E-2
|
2.788E-1
|
1.000E0
|
2
|
200
|
42
|
M3869
|
Genes up-regulated in comparison of dendritic cells (DC) stimulated with Pam3Csk4 (TLR1/2 agonist) at 16 h versus DC cells stimulated with CpG DNA (TLR9 agonist) at 16 h.
|
MSigDB C7: Immunologic Signatures (v6.0)
|
2.012E-3
|
3.741E-2
|
2.788E-1
|
1.000E0
|
2
|
200
|
43
|
M8764
|
Genes up-regulated in monocytes: CD16- versus CD16+.
|
MSigDB C7: Immunologic Signatures (v6.0)
|
2.012E-3
|
3.741E-2
|
2.788E-1
|
1.000E0
|
2
|
200
|
44
|
M4978
|
Genes up-regulated in comparison of plasmacytoid dendritic cells (pDC) from influenza vaccinee pre-vaccination versus those at day 7 post-vaccination.
|
MSigDB C7: Immunologic Signatures (v6.0)
|
2.012E-3
|
3.741E-2
|
2.788E-1
|
1.000E0
|
2
|
200
|
45
|
M4094
|
Genes down-regulated in comparison of dendritic cells (DC) stimulated with poly(I:C) (TLR3 agonist) at 0.5 h versus those stimulated at 8 h.
|
MSigDB C7: Immunologic Signatures (v6.0)
|
2.012E-3
|
3.741E-2
|
2.788E-1
|
1.000E0
|
2
|
200
|
46
|
M8985
|
Genes up-regulated in CD4 [GeneID=920] T cells over-expressing FOXP3 [GeneID=50943] and PPARg1 isoform of PPARG [GeneID=5468]: GW1929 [PubChem=6518171] versus pioglitazone [PubChem=4829].
|
MSigDB C7: Immunologic Signatures (v6.0)
|
2.012E-3
|
3.741E-2
|
2.788E-1
|
1.000E0
|
2
|
200
|
47
|
M6620
|
Genes up-regulated in bone marrow-derived macrophages with IL6 [GeneID=3569] knockout and 45 min of stimulation by: LPS versus IL6 [GeneID=3569] and LPS.
|
MSigDB C7: Immunologic Signatures (v6.0)
|
2.012E-3
|
3.741E-2
|
2.788E-1
|
1.000E0
|
2
|
200
|
48
|
M3749
|
Genes up-regulated in comparison of control dendritic cells (DC) at 12 h versus those stimulated with Pam3Csk4 (TLR1/2 agonist) at 12 h.
|
MSigDB C7: Immunologic Signatures (v6.0)
|
2.012E-3
|
3.741E-2
|
2.788E-1
|
1.000E0
|
2
|
200
|
49
|
M8635
|
Genes down-regulated in bone marrow-derived dendritic cells treated with 1,3-beta-D-oligoglucan [PubChem=11375554]: low dose versus high dose.
|
MSigDB C7: Immunologic Signatures (v6.0)
|
2.012E-3
|
3.741E-2
|
2.788E-1
|
1.000E0
|
2
|
200
|
50
|
M8470
|
Genes down-regulated in activated CD4 [GeneID=920] T cells with MIR17 [GeneID=406952] perturbation: knockout versus over-expression.
|
MSigDB C7: Immunologic Signatures (v6.0)
|
2.012E-3
|
3.741E-2
|
2.788E-1
|
1.000E0
|
2
|
200
|