|
ID |
Name |
Source |
pValue |
FDR B&H |
FDR B&Y |
Bonferroni |
Genes from Input
|
Genes in Annotation
|
1
|
12683974
|
Messenger RNA editing in mammals: new members of the APOBEC family seeking roles in the family business.
|
Pubmed
|
4.631E-24
|
8.497E-21
|
6.876E-20
|
8.497E-21
|
7
|
11
|
2
|
22720156
|
APOBEC3 versus Retroviruses, Immunity versus Invasion: Clash of the Titans.
|
Pubmed
|
4.094E-18
|
2.504E-15
|
2.026E-14
|
7.512E-15
|
5
|
6
|
3
|
22912627
|
Retroelements versus APOBEC3 family members: No great escape from the magnificent seven.
|
Pubmed
|
4.094E-18
|
2.504E-15
|
2.026E-14
|
7.512E-15
|
5
|
6
|
4
|
21835787
|
Human and rhesus APOBEC3D, APOBEC3F, APOBEC3G, and APOBEC3H demonstrate a conserved capacity to restrict Vif-deficient HIV-1.
|
Pubmed
|
1.433E-17
|
5.258E-15
|
4.255E-14
|
2.629E-14
|
5
|
7
|
5
|
23043100
|
The restriction factors of human immunodeficiency virus.
|
Pubmed
|
1.433E-17
|
5.258E-15
|
4.255E-14
|
2.629E-14
|
5
|
7
|
6
|
24227842
|
APOBEC3 deaminases induce hypermutation in human papillomavirus 16 DNA upon beta interferon stimulation.
|
Pubmed
|
3.820E-17
|
1.168E-14
|
9.453E-14
|
7.009E-14
|
5
|
8
|
7
|
20174454
|
Leveraging APOBEC3 proteins to alter the HIV mutation rate and combat AIDS.
|
Pubmed
|
1.718E-16
|
3.942E-14
|
3.190E-13
|
3.153E-13
|
5
|
10
|
8
|
23043103
|
Introduction to thematic minireview series: Understanding human immunodeficiency virus-host interactions at the biochemical level.
|
Pubmed
|
1.718E-16
|
3.942E-14
|
3.190E-13
|
3.153E-13
|
5
|
10
|
9
|
22915799
|
HIV-1 replication and APOBEC3 antiviral activity are not regulated by P bodies.
|
Pubmed
|
3.150E-16
|
6.423E-14
|
5.197E-13
|
5.780E-13
|
5
|
11
|
10
|
19649317
|
CEM-T4 cells do not lack an APOBEC3G cofactor.
|
Pubmed
|
3.723E-15
|
4.879E-13
|
3.949E-12
|
6.831E-12
|
4
|
4
|
11
|
23097438
|
APOBEC3G restricts HIV-1 to a greater extent than APOBEC3F and APOBEC3DE in human primary CD4+ T cells and macrophages.
|
Pubmed
|
3.723E-15
|
4.879E-13
|
3.949E-12
|
6.831E-12
|
4
|
4
|
12
|
22203821
|
Structural Features of Antiviral APOBEC3 Proteins are Linked to Their Functional Activities.
|
Pubmed
|
3.723E-15
|
4.879E-13
|
3.949E-12
|
6.831E-12
|
4
|
4
|
13
|
19344514
|
A novel HIV-1 restriction factor that is biologically distinct from APOBEC3 cytidine deaminases in a human T cell line CEM.NKR.
|
Pubmed
|
3.723E-15
|
4.879E-13
|
3.949E-12
|
6.831E-12
|
4
|
4
|
14
|
27439715
|
APOBEC3 proteins can copackage and comutate HIV-1 genomes.
|
Pubmed
|
3.723E-15
|
4.879E-13
|
3.949E-12
|
6.831E-12
|
4
|
4
|
15
|
25461536
|
A computational analysis of the structural determinants of APOBEC3's catalytic activity and vulnerability to HIV-1 Vif.
|
Pubmed
|
1.861E-14
|
1.797E-12
|
1.455E-11
|
3.415E-11
|
4
|
5
|
16
|
18577210
|
HIV-1 Vif, APOBEC, and intrinsic immunity.
|
Pubmed
|
1.861E-14
|
1.797E-12
|
1.455E-11
|
3.415E-11
|
4
|
5
|
17
|
18304004
|
The APOBEC3 cytidine deaminases: an innate defensive network opposing exogenous retroviruses and endogenous retroelements.
|
Pubmed
|
1.861E-14
|
1.797E-12
|
1.455E-11
|
3.415E-11
|
4
|
5
|
18
|
25206352
|
Suppression of APOBEC3-mediated restriction of HIV-1 by Vif.
|
Pubmed
|
1.861E-14
|
1.797E-12
|
1.455E-11
|
3.415E-11
|
4
|
5
|
19
|
25352838
|
AID and APOBECs span the gap between innate and adaptive immunity.
|
Pubmed
|
1.861E-14
|
1.797E-12
|
1.455E-11
|
3.415E-11
|
4
|
5
|
20
|
22205746
|
Vif proteins of human and simian immunodeficiency viruses require cellular CBFβ to degrade APOBEC3 restriction factors.
|
Pubmed
|
5.582E-14
|
4.656E-12
|
3.768E-11
|
1.024E-10
|
4
|
6
|
21
|
23825473
|
Macaques as model hosts for studies of HIV-1 infection.
|
Pubmed
|
5.582E-14
|
4.656E-12
|
3.768E-11
|
1.024E-10
|
4
|
6
|
22
|
24657093
|
Structure-guided analysis of the human APOBEC3-HIV restrictome.
|
Pubmed
|
5.582E-14
|
4.656E-12
|
3.768E-11
|
1.024E-10
|
4
|
6
|
23
|
20062055
|
APOBEC3 proteins mediate the clearance of foreign DNA from human cells.
|
Pubmed
|
1.302E-13
|
9.559E-12
|
7.736E-11
|
2.390E-10
|
4
|
7
|
24
|
11863358
|
An anthropoid-specific locus of orphan C to U RNA-editing enzymes on chromosome 22.
|
Pubmed
|
1.302E-13
|
9.559E-12
|
7.736E-11
|
2.390E-10
|
4
|
7
|
25
|
19911124
|
APOBEC deaminases-mutases with defensive roles for immunity.
|
Pubmed
|
1.302E-13
|
9.559E-12
|
7.736E-11
|
2.390E-10
|
4
|
7
|
26
|
19008196
|
APOBEC3G: an intracellular centurion.
|
Pubmed
|
2.604E-13
|
1.770E-11
|
1.432E-10
|
4.779E-10
|
4
|
8
|
27
|
19038776
|
APOBEC proteins and intrinsic resistance to HIV-1 infection.
|
Pubmed
|
2.604E-13
|
1.770E-11
|
1.432E-10
|
4.779E-10
|
4
|
8
|
28
|
25408426
|
The assembly of Vif ubiquitin E3 ligase for APOBEC3 degradation.
|
Pubmed
|
4.687E-13
|
3.072E-11
|
2.486E-10
|
8.601E-10
|
4
|
9
|
29
|
12859895
|
Species-specific exclusion of APOBEC3G from HIV-1 virions by Vif.
|
Pubmed
|
1.294E-12
|
8.186E-11
|
6.624E-10
|
2.374E-9
|
5
|
49
|
30
|
24189052
|
Multiple APOBEC3 restriction factors for HIV-1 and one Vif to rule them all.
|
Pubmed
|
8.843E-12
|
5.409E-10
|
4.377E-9
|
1.623E-8
|
4
|
17
|
31
|
20096141
|
Interactions of host APOBEC3 restriction factors with HIV-1 in vivo: implications for therapeutics.
|
Pubmed
|
1.137E-11
|
6.655E-10
|
5.386E-9
|
2.086E-8
|
4
|
18
|
32
|
24139399
|
HIV-1 Vif adaptation to human APOBEC3H haplotypes.
|
Pubmed
|
1.777E-11
|
6.655E-10
|
5.386E-9
|
3.261E-8
|
3
|
3
|
33
|
25330146
|
APOBEC3D and APOBEC3F potently promote HIV-1 diversification and evolution in humanized mouse model.
|
Pubmed
|
1.777E-11
|
6.655E-10
|
5.386E-9
|
3.261E-8
|
3
|
3
|
34
|
27289067
|
APOBEC3DE Antagonizes Hepatitis B Virus Restriction Factors APOBEC3F and APOBEC3G.
|
Pubmed
|
1.777E-11
|
6.655E-10
|
5.386E-9
|
3.261E-8
|
3
|
3
|
35
|
17020885
|
Reversed functional organization of mouse and human APOBEC3 cytidine deaminase domains.
|
Pubmed
|
1.777E-11
|
6.655E-10
|
5.386E-9
|
3.261E-8
|
3
|
3
|
36
|
24942576
|
HIV-1 and HIV-2 Vif interact with human APOBEC3 proteins using completely different determinants.
|
Pubmed
|
1.777E-11
|
6.655E-10
|
5.386E-9
|
3.261E-8
|
3
|
3
|
37
|
22807680
|
Endogenous origins of HIV-1 G-to-A hypermutation and restriction in the nonpermissive T cell line CEM2n.
|
Pubmed
|
1.777E-11
|
6.655E-10
|
5.386E-9
|
3.261E-8
|
3
|
3
|
38
|
19561087
|
A portable hot spot recognition loop transfers sequence preferences from APOBEC family members to activation-induced cytidine deaminase.
|
Pubmed
|
1.777E-11
|
6.655E-10
|
5.386E-9
|
3.261E-8
|
3
|
3
|
39
|
15269786
|
Ancient adaptive evolution of the primate antiviral DNA-editing enzyme APOBEC3G.
|
Pubmed
|
1.777E-11
|
6.655E-10
|
5.386E-9
|
3.261E-8
|
3
|
3
|
40
|
22013041
|
The activity spectrum of Vif from multiple HIV-1 subtypes against APOBEC3G, APOBEC3F, and APOBEC3H.
|
Pubmed
|
1.777E-11
|
6.655E-10
|
5.386E-9
|
3.261E-8
|
3
|
3
|
41
|
18976920
|
Restriction of retroviral replication by APOBEC3G/F and TRIM5alpha.
|
Pubmed
|
1.777E-11
|
6.655E-10
|
5.386E-9
|
3.261E-8
|
3
|
3
|
42
|
17067930
|
Natural resistance to HIV infection: The Vif-APOBEC interaction.
|
Pubmed
|
1.777E-11
|
6.655E-10
|
5.386E-9
|
3.261E-8
|
3
|
3
|
43
|
19939923
|
A single amino acid difference in human APOBEC3H variants determines HIV-1 Vif sensitivity.
|
Pubmed
|
1.777E-11
|
6.655E-10
|
5.386E-9
|
3.261E-8
|
3
|
3
|
44
|
16648136
|
APOBEC3B and APOBEC3F inhibit L1 retrotransposition by a DNA deamination-independent mechanism.
|
Pubmed
|
1.777E-11
|
6.655E-10
|
5.386E-9
|
3.261E-8
|
3
|
3
|
45
|
21659520
|
Phosphorylation directly regulates the intrinsic DNA cytidine deaminase activity of activation-induced deaminase and APOBEC3G protein.
|
Pubmed
|
1.777E-11
|
6.655E-10
|
5.386E-9
|
3.261E-8
|
3
|
3
|
46
|
16378963
|
Restriction of foamy viruses by APOBEC cytidine deaminases.
|
Pubmed
|
1.777E-11
|
6.655E-10
|
5.386E-9
|
3.261E-8
|
3
|
3
|
47
|
17303427
|
APOBEC-mediated viral restriction: not simply editing?
|
Pubmed
|
1.777E-11
|
6.655E-10
|
5.386E-9
|
3.261E-8
|
3
|
3
|
48
|
20538015
|
HIV-1 Vif versus the APOBEC3 cytidine deaminases: an intracellular duel between pathogen and host restriction factors.
|
Pubmed
|
1.777E-11
|
6.655E-10
|
5.386E-9
|
3.261E-8
|
3
|
3
|
49
|
25275135
|
Determinants of efficient degradation of APOBEC3 restriction factors by HIV-1 Vif.
|
Pubmed
|
1.777E-11
|
6.655E-10
|
5.386E-9
|
3.261E-8
|
3
|
3
|
50
|
19535450
|
A patch of positively charged amino acids surrounding the human immunodeficiency virus type 1 Vif SLVx4Yx9Y motif influences its interaction with APOBEC3G.
|
Pubmed
|
7.107E-11
|
2.461E-9
|
1.991E-8
|
1.304E-7
|
3
|
4
|