|
ID |
Name |
Source |
pValue |
FDR B&H |
FDR B&Y |
Bonferroni |
Genes from Input
|
Genes in Annotation
|
1
|
stomach
|
stomach
|
Human Protein Atlas
|
1.324E-5
|
2.624E-3
|
1.689E-2
|
4.633E-3
|
3
|
160
|
2
|
BrainMap/BrainAtlas - Mouse McCarroll/Lineage to Cells - regions (clevel sub)/Neuron/Neuron/inhibitory/subGroup1/Slc17a6
|
BrainMap/BrainAtlas - Mouse McCarroll/Lineage to Cells - regions (clevel sub)/Neuron/Neuron/inhibitory/subGroup1/Slc17a6
|
BrainMap
|
1.702E-5
|
2.624E-3
|
1.689E-2
|
5.956E-3
|
3
|
174
|
3
|
BrainMap BrainAtlas - Mouse McCarroll Excitatory.subGroup4 Excitatory.subGroup4 Overall Top 200 Genes
|
BrainMap BrainAtlas - Mouse McCarroll Excitatory.subGroup4 Excitatory.subGroup4 Overall Top 200 Genes
|
BrainMap
|
2.249E-5
|
2.624E-3
|
1.689E-2
|
7.872E-3
|
3
|
191
|
4
|
BrainMap BrainAtlas - Mouse McCarroll Neuron.excitatory Neuron.excitatory Subtype Excitatory.subGroup4 Top 200 Genes
|
BrainMap BrainAtlas - Mouse McCarroll Neuron.excitatory Neuron.excitatory Subtype Excitatory.subGroup4 Top 200 Genes
|
BrainMap
|
6.596E-5
|
5.771E-3
|
3.715E-2
|
2.309E-2
|
3
|
274
|
5
|
BrainMap BrainAtlas - Mouse McCarroll Excitatory.subGroup4 Excitatory.subGroup4 Subtype Excitatory.subGroup4 FrontalCortex Top 200 Genes
|
BrainMap BrainAtlas - Mouse McCarroll Excitatory.subGroup4 Excitatory.subGroup4 Subtype Excitatory.subGroup4 FrontalCortex Top 200 Genes
|
BrainMap
|
1.105E-4
|
6.504E-3
|
4.186E-2
|
3.867E-2
|
3
|
326
|
6
|
BrainMap BrainAtlas - Mouse McCarroll Excitatory.subGroup4 Excitatory.subGroup4 Subtype Excitatory.subGroup4 PosteriorCortex Top 200 Genes
|
BrainMap BrainAtlas - Mouse McCarroll Excitatory.subGroup4 Excitatory.subGroup4 Subtype Excitatory.subGroup4 PosteriorCortex Top 200 Genes
|
BrainMap
|
1.115E-4
|
6.504E-3
|
4.186E-2
|
3.902E-2
|
3
|
327
|
7
|
BrainMap BrainAtlas - Mouse McCarroll Excitatory.subGroup4 Excitatory.subGroup4 Subtype Excitatory.subGroup4 Hippocampus Top 200 Genes
|
BrainMap BrainAtlas - Mouse McCarroll Excitatory.subGroup4 Excitatory.subGroup4 Subtype Excitatory.subGroup4 Hippocampus Top 200 Genes
|
BrainMap
|
1.307E-4
|
6.534E-3
|
4.205E-2
|
4.574E-2
|
3
|
345
|
8
|
pancreas
|
pancreas
|
Human Protein Atlas
|
2.107E-4
|
8.850E-3
|
5.696E-2
|
7.374E-2
|
2
|
70
|
9
|
Tabula Muris Consortium/Tabula Muris Consortium/Tissues and cell class/Pancreas/pancreatic acinar cell
|
Tabula Muris Consortium/Tabula Muris Consortium/Tissues and cell class/Pancreas/pancreatic acinar cell
|
Tabula Muris Consortium
|
3.330E-4
|
8.850E-3
|
5.696E-2
|
1.166E-1
|
2
|
88
|
10
|
PCBC MESO-5 blastocyst 500
|
Progenitor-Cell-Biology-Consortium induced-Mesoderm fromBlastocyst-derived-humanEmbryonicStemCells top-relative-expression-ranked 500
|
PCBC
|
3.526E-4
|
8.850E-3
|
5.696E-2
|
1.234E-1
|
3
|
483
|
11
|
PCBC MESO-5 fibroblast 500
|
Progenitor-Cell-Biology-Consortium induced-Mesoderm from inducedPluripotentialStemCells derived from from fibroblast top-relative-expression-ranked 500
|
PCBC
|
3.745E-4
|
8.850E-3
|
5.696E-2
|
1.311E-1
|
3
|
493
|
12
|
PCBC MESO-5 500
|
Progenitor-Cell-Biology-Consortium induced-Mesoderm top-relative-expression-ranked 500
|
PCBC
|
3.768E-4
|
8.850E-3
|
5.696E-2
|
1.319E-1
|
3
|
494
|
13
|
BrainMap/BrainAtlas - Mouse McCarroll/Lineage to Cells - regions (clevel sub)/Polydendrocyte/Polydendrocyte/Bmp4 C1q/Tnr//Tmsb4x
|
BrainMap/BrainAtlas - Mouse McCarroll/Lineage to Cells - regions (clevel sub)/Polydendrocyte/Polydendrocyte/Bmp4 C1q/Tnr//Tmsb4x
|
BrainMap
|
3.799E-4
|
8.850E-3
|
5.696E-2
|
1.330E-1
|
2
|
94
|
14
|
PCBC MESO-5 100
|
Progenitor-Cell-Biology-Consortium induced-Mesoderm top-relative-expression-ranked 100
|
PCBC
|
4.213E-4
|
8.850E-3
|
5.696E-2
|
1.475E-1
|
2
|
99
|
15
|
PCBC MESO-5 fibroblast 100
|
Progenitor-Cell-Biology-Consortium induced-Mesoderm from inducedPluripotentialStemCells derived from from fibroblast top-relative-expression-ranked 100
|
PCBC
|
4.213E-4
|
8.850E-3
|
5.696E-2
|
1.475E-1
|
2
|
99
|
16
|
PCBC ratio MESO-5 vs SC 100
|
ratio induced-Mesoderm vs StemCell top-relative-expression-ranked 100
|
PCBC
|
4.213E-4
|
8.850E-3
|
5.696E-2
|
1.475E-1
|
2
|
99
|
17
|
PCBC ECTO 100
|
Progenitor-Cell-Biology-Consortium induced-Ectoderm top-relative-expression-ranked 100
|
PCBC
|
4.298E-4
|
8.850E-3
|
5.696E-2
|
1.504E-1
|
2
|
100
|
18
|
Sample Type by Project: Shred 1/TCGA-Stomach/Stomach Adenocarcinoma/Stomach Adenocarcinoma - NOS/0
|
Sample Type by Project: Shred 1/TCGA-Stomach/Stomach Adenocarcinoma/Stomach Adenocarcinoma - NOS/0
|
TCGA-Stomach
|
6.598E-4
|
1.283E-2
|
8.258E-2
|
2.309E-1
|
2
|
124
|
19
|
Sample Type by Project: Shred 1/TCGA-Pancreas/Pancreatic Adenocarcinoma/Colloid (Mucinous Noncystic) Carcinoma/4
|
Sample Type by Project: Shred 1/TCGA-Pancreas/Pancreatic Adenocarcinoma/Colloid (Mucinous Noncystic) Carcinoma/4
|
TCGA-Pancreas
|
7.137E-4
|
1.315E-2
|
8.463E-2
|
2.498E-1
|
2
|
129
|
20
|
BrainMap/BrainAtlas - Mouse McCarroll/Lineage to Cells - regions (clevel sub)/Oligodendrocyte/Oligodendrocyte/Pdgfa-hi oligodendrocytes/Tnf
|
BrainMap/BrainAtlas - Mouse McCarroll/Lineage to Cells - regions (clevel sub)/Oligodendrocyte/Oligodendrocyte/Pdgfa-hi oligodendrocytes/Tnf
|
BrainMap
|
7.584E-4
|
1.327E-2
|
8.543E-2
|
2.654E-1
|
2
|
133
|
21
|
Sample Type by Project: Shred 1/TCGA-Lung/Lung Carcinoma/Lung Squamous Cell Carcinoma/3/0
|
Sample Type by Project: Shred 1/TCGA-Lung/Lung Carcinoma/Lung Squamous Cell Carcinoma/3/0
|
TCGA-Lung
|
9.503E-4
|
1.445E-2
|
9.303E-2
|
3.326E-1
|
2
|
149
|
22
|
BrainMap/BrainAtlas - Mouse McCarroll/Lineage to Cells - regions (clevel sub)/Neuron/Neuron/excitatory/subGroup5/Syt6
|
BrainMap/BrainAtlas - Mouse McCarroll/Lineage to Cells - regions (clevel sub)/Neuron/Neuron/excitatory/subGroup5/Syt6
|
BrainMap
|
1.081E-3
|
1.445E-2
|
9.303E-2
|
3.783E-1
|
2
|
159
|
23
|
Sample Type by Project: Shred 1/TCGA-Esophagus/Esophageal Carcinoma/Adenocarcinoma/1/0
|
Sample Type by Project: Shred 1/TCGA-Esophagus/Esophageal Carcinoma/Adenocarcinoma/1/0
|
TCGA-Esophagus
|
1.122E-3
|
1.445E-2
|
9.303E-2
|
3.926E-1
|
2
|
162
|
24
|
BrainMap/BrainAtlas - Mouse McCarroll/Lineage to Cells - regions (clevel sub)/Neuron/Neuron/excitatory/subGroup4/Grp
|
BrainMap/BrainAtlas - Mouse McCarroll/Lineage to Cells - regions (clevel sub)/Neuron/Neuron/excitatory/subGroup4/Grp
|
BrainMap
|
1.263E-3
|
1.445E-2
|
9.303E-2
|
4.421E-1
|
2
|
172
|
25
|
BrainMap/BrainAtlas - Mouse McCarroll/Lineage to Cells - regions (clevel sub)/Neuron/Neuron/inhibitory/subGroup2/Cpne5
|
BrainMap/BrainAtlas - Mouse McCarroll/Lineage to Cells - regions (clevel sub)/Neuron/Neuron/inhibitory/subGroup2/Cpne5
|
BrainMap
|
1.337E-3
|
1.445E-2
|
9.303E-2
|
4.678E-1
|
2
|
177
|
26
|
BrainMap BrainAtlas - Mouse McCarroll PosteriorCortex PosteriorCortex Overall Top 200 Genes
|
BrainMap BrainAtlas - Mouse McCarroll PosteriorCortex PosteriorCortex Overall Top 200 Genes
|
BrainMap
|
1.459E-3
|
1.445E-2
|
9.303E-2
|
5.106E-1
|
2
|
185
|
27
|
BrainMap BrainAtlas - Mouse McCarroll Excitatory.subGroup6 Excitatory.subGroup6 Overall Top 200 Genes
|
BrainMap BrainAtlas - Mouse McCarroll Excitatory.subGroup6 Excitatory.subGroup6 Overall Top 200 Genes
|
BrainMap
|
1.506E-3
|
1.445E-2
|
9.303E-2
|
5.271E-1
|
2
|
188
|
28
|
BrainMap BrainAtlas - Mouse McCarroll Excitatory.subGroup2 Excitatory.subGroup2 Overall Top 200 Genes
|
BrainMap BrainAtlas - Mouse McCarroll Excitatory.subGroup2 Excitatory.subGroup2 Overall Top 200 Genes
|
BrainMap
|
1.506E-3
|
1.445E-2
|
9.303E-2
|
5.271E-1
|
2
|
188
|
29
|
BrainMap BrainAtlas - Mouse McCarroll Excitatory.subGroup6 Excitatory.subGroup6 Top 200
|
BrainMap BrainAtlas - Mouse McCarroll Excitatory.subGroup6 Excitatory.subGroup6 Top 200
|
BrainMap
|
1.506E-3
|
1.445E-2
|
9.303E-2
|
5.271E-1
|
2
|
188
|
30
|
BrainMap BrainAtlas - Mouse McCarroll Neuron.excitatory.Slc17a7,Slc17a6 Neuron.excitatory.Slc17a7,Slc17a6 Overall Top 200 Genes
|
BrainMap BrainAtlas - Mouse McCarroll Neuron.excitatory.Slc17a7,Slc17a6 Neuron.excitatory.Slc17a7,Slc17a6 Overall Top 200 Genes
|
BrainMap
|
1.506E-3
|
1.445E-2
|
9.303E-2
|
5.271E-1
|
2
|
188
|
31
|
BrainMap BrainAtlas - Mouse McCarroll Neuron.excitatory.Slc17a7,Slc17a6 Neuron.excitatory.Slc17a7,Slc17a6 Top 200
|
BrainMap BrainAtlas - Mouse McCarroll Neuron.excitatory.Slc17a7,Slc17a6 Neuron.excitatory.Slc17a7,Slc17a6 Top 200
|
BrainMap
|
1.506E-3
|
1.445E-2
|
9.303E-2
|
5.271E-1
|
2
|
188
|
32
|
BrainMap/BrainAtlas - Mouse McCarroll/Lineage to Cells - regions (clevel sub)/Neuron/Neuron/mixed excitatory
|
BrainMap/BrainAtlas - Mouse McCarroll/Lineage to Cells - regions (clevel sub)/Neuron/Neuron/mixed excitatory
|
BrainMap
|
1.538E-3
|
1.445E-2
|
9.303E-2
|
5.382E-1
|
2
|
190
|
33
|
BrainMap BrainAtlas - Mouse McCarroll FrontalCortex FrontalCortex Overall Top 200 Genes
|
BrainMap BrainAtlas - Mouse McCarroll FrontalCortex FrontalCortex Overall Top 200 Genes
|
BrainMap
|
1.538E-3
|
1.445E-2
|
9.303E-2
|
5.382E-1
|
2
|
190
|
34
|
BrainMap/BrainAtlas - Mouse McCarroll/Lineage to Cells - regions (clevel sub)/Neuron/Neuron/excitatory
|
BrainMap/BrainAtlas - Mouse McCarroll/Lineage to Cells - regions (clevel sub)/Neuron/Neuron/excitatory
|
BrainMap
|
1.570E-3
|
1.445E-2
|
9.303E-2
|
5.495E-1
|
2
|
192
|
35
|
Sample Type by Project: Shred 1/TCGA-Brain/Low Grade Glioma/Oligoastrocytoma/4
|
Sample Type by Project: Shred 1/TCGA-Brain/Low Grade Glioma/Oligoastrocytoma/4
|
TCGA-Brain
|
1.602E-3
|
1.445E-2
|
9.303E-2
|
5.608E-1
|
2
|
194
|
36
|
Sample Type by Project: Shred 1/TCGA-Brain/Low Grade Glioma/Astrocytoma/4
|
Sample Type by Project: Shred 1/TCGA-Brain/Low Grade Glioma/Astrocytoma/4
|
TCGA-Brain
|
1.602E-3
|
1.445E-2
|
9.303E-2
|
5.608E-1
|
2
|
194
|
37
|
BrainMap BrainAtlas - Mouse McCarroll Excitatory.subGroup3 Excitatory.subGroup3 Overall Top 200 Genes
|
BrainMap BrainAtlas - Mouse McCarroll Excitatory.subGroup3 Excitatory.subGroup3 Overall Top 200 Genes
|
BrainMap
|
1.635E-3
|
1.445E-2
|
9.303E-2
|
5.723E-1
|
2
|
196
|
38
|
BrainMap BrainAtlas - Mouse McCarroll Excitatory.subGroup3 Excitatory.subGroup3 Top 200
|
BrainMap BrainAtlas - Mouse McCarroll Excitatory.subGroup3 Excitatory.subGroup3 Top 200
|
BrainMap
|
1.635E-3
|
1.445E-2
|
9.303E-2
|
5.723E-1
|
2
|
196
|
39
|
BrainMap BrainAtlas - Mouse McCarroll Hippocampus Hippocampus Top 200
|
BrainMap BrainAtlas - Mouse McCarroll Hippocampus Hippocampus Top 200
|
BrainMap
|
1.652E-3
|
1.445E-2
|
9.303E-2
|
5.781E-1
|
2
|
197
|
40
|
BrainMap BrainAtlas - Mouse McCarroll Hippocampus Hippocampus Overall Top 200 Genes
|
BrainMap BrainAtlas - Mouse McCarroll Hippocampus Hippocampus Overall Top 200 Genes
|
BrainMap
|
1.652E-3
|
1.445E-2
|
9.303E-2
|
5.781E-1
|
2
|
197
|
41
|
BrainMap/BrainAtlas - Mouse McCarroll/Lineage to Cells - regions (clevel sub)/Oligodendrocyte/Oligodendrocyte/Pdgfa-hi oligodendrocytes/Tnf//Kif5b
|
BrainMap/BrainAtlas - Mouse McCarroll/Lineage to Cells - regions (clevel sub)/Oligodendrocyte/Oligodendrocyte/Pdgfa-hi oligodendrocytes/Tnf//Kif5b
|
BrainMap
|
1.923E-3
|
1.641E-2
|
1.056E-1
|
6.730E-1
|
1
|
6
|
42
|
BrainMap/BrainAtlas - Mouse McCarroll/Tissue and Type by Type - Tissue vs Type (clevel sub)/FrontalCortex
|
BrainMap/BrainAtlas - Mouse McCarroll/Tissue and Type by Type - Tissue vs Type (clevel sub)/FrontalCortex
|
BrainMap
|
2.883E-3
|
2.393E-2
|
1.540E-1
|
1.000E0
|
1
|
9
|
43
|
BrainMap BrainAtlas - Mouse McCarroll Neuron.excitatory Neuron.excitatory Subtype Excitatory.subGroup5 Top 200 Genes
|
BrainMap BrainAtlas - Mouse McCarroll Neuron.excitatory Neuron.excitatory Subtype Excitatory.subGroup5 Top 200 Genes
|
BrainMap
|
2.940E-3
|
2.393E-2
|
1.540E-1
|
1.000E0
|
2
|
264
|
44
|
BrainMap BrainAtlas - Mouse McCarroll Neuron.excitatory Neuron.excitatory Subtype Excitatory.subGroup6 Top 200 Genes
|
BrainMap BrainAtlas - Mouse McCarroll Neuron.excitatory Neuron.excitatory Subtype Excitatory.subGroup6 Top 200 Genes
|
BrainMap
|
3.117E-3
|
2.480E-2
|
1.596E-1
|
1.000E0
|
2
|
272
|
45
|
BrainMap/BrainAtlas - Mouse McCarroll/Tissue and Type by Type - Tissue vs Type (clevel sub)/Hippocampus
|
BrainMap/BrainAtlas - Mouse McCarroll/Tissue and Type by Type - Tissue vs Type (clevel sub)/Hippocampus
|
BrainMap
|
3.203E-3
|
2.491E-2
|
1.603E-1
|
1.000E0
|
1
|
10
|
46
|
BrainMap BrainAtlas - Mouse McCarroll Neuron.excitatory Neuron.excitatory Subtype Excitatory.subGroup3 Top 200 Genes
|
BrainMap BrainAtlas - Mouse McCarroll Neuron.excitatory Neuron.excitatory Subtype Excitatory.subGroup3 Top 200 Genes
|
BrainMap
|
3.369E-3
|
2.564E-2
|
1.650E-1
|
1.000E0
|
2
|
283
|
47
|
BrainMap BrainAtlas - Mouse McCarroll Excitatory.subGroup2 Excitatory.subGroup2 Subtype Excitatory.subGroup2 GlobusPallidus Top 200 Genes
|
BrainMap BrainAtlas - Mouse McCarroll Excitatory.subGroup2 Excitatory.subGroup2 Subtype Excitatory.subGroup2 GlobusPallidus Top 200 Genes
|
BrainMap
|
3.582E-3
|
2.668E-2
|
1.717E-1
|
1.000E0
|
2
|
292
|
48
|
ratio MESO vs SC 500 K1
|
ratio induced-Mesoderm vs StemCell top-relative-expression-ranked 500 k-means-cluster#1
|
PCBC
|
3.703E-3
|
2.698E-2
|
1.737E-1
|
1.000E0
|
2
|
297
|
49
|
ratio DE vs SC 500 K5
|
ratio induced-DefinitiveEndoderm vs StemCell top-relative-expression-ranked 500 k-means-cluster#5
|
PCBC
|
3.777E-3
|
2.698E-2
|
1.737E-1
|
1.000E0
|
2
|
300
|
50
|
BrainMap BrainAtlas - Mouse McCarroll Neuron.excitatory Neuron.excitatory Subtype Neuron.excitatory.Slc17a7 Top 200 Genes
|
BrainMap BrainAtlas - Mouse McCarroll Neuron.excitatory Neuron.excitatory Subtype Neuron.excitatory.Slc17a7 Top 200 Genes
|
BrainMap
|
4.104E-3
|
2.801E-2
|
1.803E-1
|
1.000E0
|
2
|
313
|