|
ID |
Name |
Source |
pValue |
FDR B&H |
FDR B&Y |
Bonferroni |
Genes from Input
|
Genes in Annotation
|
1
|
BrainMap BrainAtlas - Mouse McCarroll Excitatory.subGroup5 Excitatory.subGroup5 Subtype Excitatory.subGroup5 PosteriorCortex Top 200 Genes
|
BrainMap BrainAtlas - Mouse McCarroll Excitatory.subGroup5 Excitatory.subGroup5 Subtype Excitatory.subGroup5 PosteriorCortex Top 200 Genes
|
BrainMap
|
2.419E-5
|
5.673E-3
|
3.798E-2
|
1.096E-2
|
3
|
296
|
2
|
BrainMap BrainAtlas - Human / Mouse Linnarsson Neuron Neuron Subtype Interneuron-selective Top 200 Genes
|
BrainMap BrainAtlas - Human / Mouse Linnarsson Neuron Neuron Subtype Interneuron-selective Top 200 Genes
|
BrainMap
|
2.913E-5
|
5.673E-3
|
3.798E-2
|
1.320E-2
|
3
|
315
|
3
|
BrainMap BrainAtlas - Mouse McCarroll Neuron.inhibitory.Gad1,Gad2 Neuron.inhibitory.Gad1,Gad2 Subtype Neuron.inhibitory.Gad1,Gad2.Synpr,Pcdh11x Top 200 Genes
|
BrainMap BrainAtlas - Mouse McCarroll Neuron.inhibitory.Gad1,Gad2 Neuron.inhibitory.Gad1,Gad2 Subtype Neuron.inhibitory.Gad1,Gad2.Synpr,Pcdh11x Top 200 Genes
|
BrainMap
|
3.757E-5
|
5.673E-3
|
3.798E-2
|
1.702E-2
|
3
|
343
|
4
|
BrainMap BrainAtlas - Mouse McCarroll Excitatory.subGroup5 Excitatory.subGroup5 Top 200
|
BrainMap BrainAtlas - Mouse McCarroll Excitatory.subGroup5 Excitatory.subGroup5 Top 200
|
BrainMap
|
8.000E-5
|
9.060E-3
|
6.065E-2
|
3.624E-2
|
3
|
442
|
5
|
6mo cortical organoids wt 6mo cortical organoids wt mature-like mature-like Subtype M.2.1 Top 100 Genes
|
6mo cortical organoids wt 6mo cortical organoids wt mature-like mature-like Subtype M.2.1 Top 100 Genes
|
|
4.566E-4
|
1.457E-2
|
9.755E-2
|
2.068E-1
|
2
|
149
|
6
|
6mo cortical organoids wt 6mo cortical organoids wt mature-like mature-like Subtype M.1.1 Top 100 Genes
|
6mo cortical organoids wt 6mo cortical organoids wt mature-like mature-like Subtype M.1.1 Top 100 Genes
|
|
4.814E-4
|
1.457E-2
|
9.755E-2
|
2.181E-1
|
2
|
153
|
7
|
6mo cortical organoids wt 6mo cortical organoids wt Subtype immature neuro precursors s11 immature neuro precursors Subtype immature neuro precursors s11 Top 100 Genes
|
6mo cortical organoids wt 6mo cortical organoids wt Subtype immature neuro precursors s11 immature neuro precursors Subtype immature neuro precursors s11 Top 100 Genes
|
|
5.003E-4
|
1.457E-2
|
9.755E-2
|
2.267E-1
|
2
|
156
|
8
|
Sample Type by Project: Shred 1/TCGA-Esophagus/Esophageal Carcinoma/Adenocarcinoma/1/0
|
Sample Type by Project: Shred 1/TCGA-Esophagus/Esophageal Carcinoma/Adenocarcinoma/1/0
|
TCGA-Esophagus
|
5.394E-4
|
1.457E-2
|
9.755E-2
|
2.443E-1
|
2
|
162
|
9
|
Sample Type by Project: Shred 1/TCGA-Thryoid/Thyroid Papillary Carcinoma/Classical/4/0
|
Sample Type by Project: Shred 1/TCGA-Thryoid/Thyroid Papillary Carcinoma/Classical/4/0
|
TCGA-Thryoid
|
5.527E-4
|
1.457E-2
|
9.755E-2
|
2.504E-1
|
2
|
164
|
10
|
6mo cortical organoids wt 6mo cortical organoids wt Subtype immature neuro precursors s4 immature neuro precursors Subtype immature neuro precursors s4 Top 100 Genes
|
6mo cortical organoids wt 6mo cortical organoids wt Subtype immature neuro precursors s4 immature neuro precursors Subtype immature neuro precursors s4 Top 100 Genes
|
|
5.799E-4
|
1.457E-2
|
9.755E-2
|
2.627E-1
|
2
|
168
|
11
|
gudmap dev lower uro neuro e15.5 BladdPelvicGanglion Sox10 200
|
dev lower uro neuro e15.5 BladdPelvicGanglion Sox10 top-relative-expression-ranked 200
|
Gudmap Mouse ST 1.0
|
5.937E-4
|
1.457E-2
|
9.755E-2
|
2.690E-1
|
2
|
170
|
12
|
6mo cortical organoids wt 6mo cortical organoids wt mature-like mature-like Subtype M.2.3 Top 100 Genes
|
6mo cortical organoids wt 6mo cortical organoids wt mature-like mature-like Subtype M.2.3 Top 100 Genes
|
|
6.219E-4
|
1.457E-2
|
9.755E-2
|
2.817E-1
|
2
|
174
|
13
|
6mo cortical organoids wt 6mo cortical organoids wt mature-like mature-like Subtype M.1.4 Top 100 Genes
|
6mo cortical organoids wt 6mo cortical organoids wt mature-like mature-like Subtype M.1.4 Top 100 Genes
|
|
6.434E-4
|
1.457E-2
|
9.755E-2
|
2.914E-1
|
2
|
177
|
14
|
Glioblastoma Single Cell Merged Neuron Top 200
|
Glioblastoma Single Cell Merged Neuron Top 200
|
|
7.101E-4
|
1.457E-2
|
9.755E-2
|
3.217E-1
|
2
|
186
|
15
|
Glioblastoma Single Cell Merged Neuron Overall Top 200 Genes
|
Glioblastoma Single Cell Merged Neuron Overall Top 200 Genes
|
|
7.101E-4
|
1.457E-2
|
9.755E-2
|
3.217E-1
|
2
|
186
|
16
|
BrainMap BrainAtlas - Mouse McCarroll Neuron.excitatory.Slc17a6,Slc17a7 Neuron.excitatory.Slc17a6,Slc17a7 Overall Top 200 Genes
|
BrainMap BrainAtlas - Mouse McCarroll Neuron.excitatory.Slc17a6,Slc17a7 Neuron.excitatory.Slc17a6,Slc17a7 Overall Top 200 Genes
|
BrainMap
|
7.330E-4
|
1.457E-2
|
9.755E-2
|
3.321E-1
|
2
|
189
|
17
|
BrainMap BrainAtlas - Mouse McCarroll Neuron.excitatory.Slc17a6,Slc17a7 Neuron.excitatory.Slc17a6,Slc17a7 Top 200
|
BrainMap BrainAtlas - Mouse McCarroll Neuron.excitatory.Slc17a6,Slc17a7 Neuron.excitatory.Slc17a6,Slc17a7 Top 200
|
BrainMap
|
7.330E-4
|
1.457E-2
|
9.755E-2
|
3.321E-1
|
2
|
189
|
18
|
BrainMap BrainAtlas - Mouse McCarroll Excitatory.subGroup5 Excitatory.subGroup5 Overall Top 200 Genes
|
BrainMap BrainAtlas - Mouse McCarroll Excitatory.subGroup5 Excitatory.subGroup5 Overall Top 200 Genes
|
BrainMap
|
7.330E-4
|
1.457E-2
|
9.755E-2
|
3.321E-1
|
2
|
189
|
19
|
Sample Type by Project: Shred 1/TCGA-Brain/Low Grade Glioma/Oligodendroglioma/4/0
|
Sample Type by Project: Shred 1/TCGA-Brain/Low Grade Glioma/Oligodendroglioma/4/0
|
TCGA-Brain
|
7.407E-4
|
1.457E-2
|
9.755E-2
|
3.356E-1
|
2
|
190
|
20
|
BrainMap BrainAtlas - Mouse McCarroll Excitatory.subGroup4 Excitatory.subGroup4 Overall Top 200 Genes
|
BrainMap BrainAtlas - Mouse McCarroll Excitatory.subGroup4 Excitatory.subGroup4 Overall Top 200 Genes
|
BrainMap
|
7.485E-4
|
1.457E-2
|
9.755E-2
|
3.391E-1
|
2
|
191
|
21
|
Sample Type by Project: Shred 1/TCGA-Brain/Low Grade Glioma/Oligodendroglioma/4
|
Sample Type by Project: Shred 1/TCGA-Brain/Low Grade Glioma/Oligodendroglioma/4
|
TCGA-Brain
|
7.642E-4
|
1.457E-2
|
9.755E-2
|
3.462E-1
|
2
|
193
|
22
|
Sample Type by Project: Shred 1/TCGA-Brain/Low Grade Glioma/Oligoastrocytoma/4
|
Sample Type by Project: Shred 1/TCGA-Brain/Low Grade Glioma/Oligoastrocytoma/4
|
TCGA-Brain
|
7.721E-4
|
1.457E-2
|
9.755E-2
|
3.497E-1
|
2
|
194
|
23
|
gudmap dev lower uro neuro e14.5 BladdPelvicGanglion Sox10 200
|
dev lower uro neuro e14.5 BladdPelvicGanglion Sox10 top-relative-expression-ranked 200
|
Gudmap Mouse ST 1.0
|
7.721E-4
|
1.457E-2
|
9.755E-2
|
3.497E-1
|
2
|
194
|
24
|
Sample Type by Project: Shred 1/TCGA-Brain/Low Grade Glioma/Astrocytoma/4
|
Sample Type by Project: Shred 1/TCGA-Brain/Low Grade Glioma/Astrocytoma/4
|
TCGA-Brain
|
7.721E-4
|
1.457E-2
|
9.755E-2
|
3.497E-1
|
2
|
194
|
25
|
BrainMap BrainAtlas - Mouse McCarroll Neuron.excitatory Neuron.excitatory Subtype Excitatory.subGroup5 Top 200 Genes
|
BrainMap BrainAtlas - Mouse McCarroll Neuron.excitatory Neuron.excitatory Subtype Excitatory.subGroup5 Top 200 Genes
|
BrainMap
|
1.423E-3
|
2.578E-2
|
1.725E-1
|
6.444E-1
|
2
|
264
|
26
|
BrainMap BrainAtlas - Mouse McCarroll Neuron.excitatory Neuron.excitatory Subtype Excitatory.subGroup4 Top 200 Genes
|
BrainMap BrainAtlas - Mouse McCarroll Neuron.excitatory Neuron.excitatory Subtype Excitatory.subGroup4 Top 200 Genes
|
BrainMap
|
1.531E-3
|
2.668E-2
|
1.786E-1
|
6.936E-1
|
2
|
274
|
27
|
BrainMap BrainAtlas - Mouse McCarroll Neuron.excitatory Neuron.excitatory Subtype Neuron.excitatory.Slc17a7 Top 200 Genes
|
BrainMap BrainAtlas - Mouse McCarroll Neuron.excitatory Neuron.excitatory Subtype Neuron.excitatory.Slc17a7 Top 200 Genes
|
BrainMap
|
1.992E-3
|
2.812E-2
|
1.882E-1
|
9.023E-1
|
2
|
313
|
28
|
JC iEC 2500 K2
|
JC iEC top-relative-expression-ranked 2500 k-means-cluster#2
|
PCBC
|
2.042E-3
|
2.812E-2
|
1.882E-1
|
9.252E-1
|
2
|
317
|
29
|
BrainMap BrainAtlas - Mouse McCarroll Neuron.inhibitory.Gad1,Gad2 Neuron.inhibitory.Gad1,Gad2 Subtype Neuron.inhibitory.Gad1,Gad2.Synpr,Crispld2 Top 200 Genes
|
BrainMap BrainAtlas - Mouse McCarroll Neuron.inhibitory.Gad1,Gad2 Neuron.inhibitory.Gad1,Gad2 Subtype Neuron.inhibitory.Gad1,Gad2.Synpr,Crispld2 Top 200 Genes
|
BrainMap
|
2.042E-3
|
2.812E-2
|
1.882E-1
|
9.252E-1
|
2
|
317
|
30
|
Adult Brain Overview (690k cells, 9 regions, 565 cell clusters) BrainAtlas - Mouse McCarroll Neuron Subtype inhibitory.Gad1,Gad2 Top 200 Genes
|
Adult Brain Overview (690k cells, 9 regions, 565 cell clusters) BrainAtlas - Mouse McCarroll Neuron Subtype inhibitory.Gad1,Gad2 Top 200 Genes
|
|
2.042E-3
|
2.812E-2
|
1.882E-1
|
9.252E-1
|
2
|
317
|
31
|
BrainMap BrainAtlas - Mouse McCarroll Neuron.inhibitory Neuron.inhibitory Subtype Inhibitory.subGroup2 Top 200 Genes
|
BrainMap BrainAtlas - Mouse McCarroll Neuron.inhibitory Neuron.inhibitory Subtype Inhibitory.subGroup2 Top 200 Genes
|
BrainMap
|
2.106E-3
|
2.812E-2
|
1.882E-1
|
9.542E-1
|
2
|
322
|
32
|
BrainMap BrainAtlas - Mouse McCarroll Excitatory.subGroup4 Excitatory.subGroup4 Subtype Excitatory.subGroup4 FrontalCortex Top 200 Genes
|
BrainMap BrainAtlas - Mouse McCarroll Excitatory.subGroup4 Excitatory.subGroup4 Subtype Excitatory.subGroup4 FrontalCortex Top 200 Genes
|
BrainMap
|
2.158E-3
|
2.812E-2
|
1.882E-1
|
9.777E-1
|
2
|
326
|
33
|
BrainMap BrainAtlas - Mouse McCarroll Excitatory.subGroup4 Excitatory.subGroup4 Subtype Excitatory.subGroup4 PosteriorCortex Top 200 Genes
|
BrainMap BrainAtlas - Mouse McCarroll Excitatory.subGroup4 Excitatory.subGroup4 Subtype Excitatory.subGroup4 PosteriorCortex Top 200 Genes
|
BrainMap
|
2.171E-3
|
2.812E-2
|
1.882E-1
|
9.836E-1
|
2
|
327
|
34
|
BrainMap/BrainAtlas - Mouse McCarroll/Tissue and Type by Type - Tissue vs Type (clevel sub)/Striatum/Striatum/Neuron
|
BrainMap/BrainAtlas - Mouse McCarroll/Tissue and Type by Type - Tissue vs Type (clevel sub)/Striatum/Striatum/Neuron
|
BrainMap
|
2.289E-3
|
2.812E-2
|
1.882E-1
|
1.000E0
|
1
|
10
|
35
|
gudmap dev lower uro neuro e15.5 PelvicGanglion Sox10 k2 100
|
dev lower uro neuro e15.5 PelvicGanglion Sox10 k-means-cluster#2 top-relative-expression-ranked 100
|
Gudmap Mouse ST 1.0
|
2.289E-3
|
2.812E-2
|
1.882E-1
|
1.000E0
|
1
|
10
|
36
|
BrainMap BrainAtlas - Mouse McCarroll Excitatory.subGroup5 Excitatory.subGroup5 Subtype Excitatory.subGroup5 FrontalCortex Top 200 Genes
|
BrainMap BrainAtlas - Mouse McCarroll Excitatory.subGroup5 Excitatory.subGroup5 Subtype Excitatory.subGroup5 FrontalCortex Top 200 Genes
|
BrainMap
|
2.400E-3
|
2.812E-2
|
1.882E-1
|
1.000E0
|
2
|
344
|
37
|
BrainMap BrainAtlas - Mouse McCarroll Neuron.inhibitory.Gad1,Gad2 Neuron.inhibitory.Gad1,Gad2 Subtype Neuron.inhibitory.Gad1,Gad2.Cplx3,Reln Top 200 Genes
|
BrainMap BrainAtlas - Mouse McCarroll Neuron.inhibitory.Gad1,Gad2 Neuron.inhibitory.Gad1,Gad2 Subtype Neuron.inhibitory.Gad1,Gad2.Cplx3,Reln Top 200 Genes
|
BrainMap
|
2.400E-3
|
2.812E-2
|
1.882E-1
|
1.000E0
|
2
|
344
|
38
|
BrainMap BrainAtlas - Mouse McCarroll Excitatory.subGroup4 Excitatory.subGroup4 Subtype Excitatory.subGroup4 Hippocampus Top 200 Genes
|
BrainMap BrainAtlas - Mouse McCarroll Excitatory.subGroup4 Excitatory.subGroup4 Subtype Excitatory.subGroup4 Hippocampus Top 200 Genes
|
BrainMap
|
2.413E-3
|
2.812E-2
|
1.882E-1
|
1.000E0
|
2
|
345
|
39
|
BrainMap BrainAtlas - Mouse McCarroll Neuron.inhibitory.Gad1,Gad2 Neuron.inhibitory.Gad1,Gad2 Subtype Neuron.inhibitory.Gad1,Gad2.Synpr,Slc5a7,Chat Top 200 Genes
|
BrainMap BrainAtlas - Mouse McCarroll Neuron.inhibitory.Gad1,Gad2 Neuron.inhibitory.Gad1,Gad2 Subtype Neuron.inhibitory.Gad1,Gad2.Synpr,Slc5a7,Chat Top 200 Genes
|
BrainMap
|
2.469E-3
|
2.812E-2
|
1.882E-1
|
1.000E0
|
2
|
349
|
40
|
Adult Brain Overview (690k cells, 9 regions, 565 cell clusters) BrainAtlas - Mouse McCarroll Neuron Subtype excitatory.Slc17a6,Slc17a7 Top 200 Genes
|
Adult Brain Overview (690k cells, 9 regions, 565 cell clusters) BrainAtlas - Mouse McCarroll Neuron Subtype excitatory.Slc17a6,Slc17a7 Top 200 Genes
|
|
2.483E-3
|
2.812E-2
|
1.882E-1
|
1.000E0
|
2
|
350
|
41
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC iDA Subtype iDAc Top 200 Genes
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC iDA Subtype iDAc Top 200 Genes
|
GSE76381_iPSMoleculeCountsPMLog2
|
2.596E-3
|
2.868E-2
|
1.920E-1
|
1.000E0
|
2
|
358
|
42
|
gudmap dev lower uro neuro e15.5 PelvicGanglion Sox10 500
|
dev lower uro neuro e15.5 PelvicGanglion Sox10 top-relative-expression-ranked 500
|
Gudmap Mouse ST 1.0
|
2.800E-3
|
2.965E-2
|
1.985E-1
|
1.000E0
|
2
|
372
|
43
|
StanfordMouse+HumanSingleCells StanfordMouse+HumanSingleCells neuroblast- precursors neuroblast- precursors Subtype neuroblast- precursors s4 Top 200 Genes
|
StanfordMouse+HumanSingleCells StanfordMouse+HumanSingleCells neuroblast- precursors neuroblast- precursors Subtype neuroblast- precursors s4 Top 200 Genes
|
StanfordMouse+HumanSingleCells
|
2.814E-3
|
2.965E-2
|
1.985E-1
|
1.000E0
|
2
|
373
|
44
|
6mo cortical organoids wt 6mo cortical organoids wt Subtype immature neuro precursors Top 100
|
6mo cortical organoids wt 6mo cortical organoids wt Subtype immature neuro precursors Top 100
|
|
3.422E-3
|
3.379E-2
|
2.262E-1
|
1.000E0
|
2
|
412
|
45
|
gudmap dev lower uro neuro e14.5 BladdPelvicGanglion Sox10 k2 100
|
dev lower uro neuro e14.5 BladdPelvicGanglion Sox10 k-means-cluster#2 top-relative-expression-ranked 100
|
Gudmap Mouse ST 1.0
|
3.431E-3
|
3.379E-2
|
2.262E-1
|
1.000E0
|
1
|
15
|
46
|
gudmap dev lower uro neuro e14.5 PelvicGanglion Sox10 k1 100
|
dev lower uro neuro e14.5 PelvicGanglion Sox10 k-means-cluster#1 top-relative-expression-ranked 100
|
Gudmap Mouse ST 1.0
|
3.431E-3
|
3.379E-2
|
2.262E-1
|
1.000E0
|
1
|
15
|
47
|
gudmap dev lower uro neuro e15.5 BladdPelvicGanglion Sox10 500
|
dev lower uro neuro e15.5 BladdPelvicGanglion Sox10 top-relative-expression-ranked 500
|
Gudmap Mouse ST 1.0
|
3.604E-3
|
3.474E-2
|
2.325E-1
|
1.000E0
|
2
|
423
|
48
|
gudmap dev lower uro neuro e14.5 BladdPelvicGanglion Sox10 500
|
dev lower uro neuro e14.5 BladdPelvicGanglion Sox10 top-relative-expression-ranked 500
|
Gudmap Mouse ST 1.0
|
3.911E-3
|
3.691E-2
|
2.471E-1
|
1.000E0
|
2
|
441
|
49
|
gudmap dev lower uro neuro e14.5 PelvicGanglion Sox10 500
|
dev lower uro neuro e14.5 PelvicGanglion Sox10 top-relative-expression-ranked 500
|
Gudmap Mouse ST 1.0
|
4.303E-3
|
3.959E-2
|
2.650E-1
|
1.000E0
|
2
|
463
|
50
|
gudmap dev lower uro neuro e14.5 BladdPelvicGanglion Sox10 k2 200
|
dev lower uro neuro e14.5 BladdPelvicGanglion Sox10 k-means-cluster#2 top-relative-expression-ranked 200
|
Gudmap Mouse ST 1.0
|
4.573E-3
|
3.959E-2
|
2.650E-1
|
1.000E0
|
1
|
20
|