|
ID |
Name |
Source |
pValue |
FDR B&H |
FDR B&Y |
Bonferroni |
Genes from Input
|
Genes in Annotation
|
1
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC hRgl Subtype hRgl2a Top 40 Genes
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC hRgl Subtype hRgl2a Top 40 Genes
|
GSE76381_EmbryoMoleculeCountsPMLog2
|
6.903E-5
|
1.686E-2
|
1.275E-1
|
7.455E-2
|
2
|
58
|
2
|
gudmap dev lower uro neuro e15.5 PelvicGanglion Sox10 k3 1000
|
dev lower uro neuro e15.5 PelvicGanglion Sox10 k-means-cluster#3 top-relative-expression-ranked 1000
|
Gudmap Mouse ST 1.0
|
8.951E-5
|
1.686E-2
|
1.275E-1
|
9.667E-2
|
2
|
66
|
3
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC hProg Subtype hProgBP Top 40 Genes
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC hProg Subtype hProgBP Top 40 Genes
|
GSE76381_EmbryoMoleculeCountsPMLog2
|
9.787E-5
|
1.686E-2
|
1.275E-1
|
1.057E-1
|
2
|
69
|
4
|
Arv SC-HD 500
|
AravindRamakr StemCell-HD top-relative-expression-ranked 500
|
PCBC
|
1.094E-4
|
1.686E-2
|
1.275E-1
|
1.181E-1
|
3
|
491
|
5
|
Arv SC fibroblast 500
|
AravindRamakr StemCell from inducedPluripotentialStemCells derived from from fibroblast top-relative-expression-ranked 500
|
PCBC
|
1.094E-4
|
1.686E-2
|
1.275E-1
|
1.181E-1
|
3
|
491
|
6
|
Arv SC-H9hpx 500
|
AravindRamakr StemCell-H9hpx top-relative-expression-ranked 500
|
PCBC
|
1.114E-4
|
1.686E-2
|
1.275E-1
|
1.203E-1
|
3
|
494
|
7
|
Arv SC-hpx blastocyst 500
|
AravindRamakr StemCell-hypoxiaGrown fromBlastocyst-derived-humanEmbryonicStemCells top-relative-expression-ranked 500
|
PCBC
|
1.114E-4
|
1.686E-2
|
1.275E-1
|
1.203E-1
|
3
|
494
|
8
|
6mo cortical organoids wt 6mo cortical organoids wt Subtype 4 static Subtype 4 Top 100 Genes
|
6mo cortical organoids wt 6mo cortical organoids wt Subtype 4 static Subtype 4 Top 100 Genes
|
|
1.522E-4
|
1.686E-2
|
1.275E-1
|
1.644E-1
|
2
|
86
|
9
|
6mo cortical organoids wt 6mo cortical organoids wt Subtype 5 static Subtype 5 Top 100 Genes
|
6mo cortical organoids wt 6mo cortical organoids wt Subtype 5 static Subtype 5 Top 100 Genes
|
|
1.781E-4
|
1.686E-2
|
1.275E-1
|
1.923E-1
|
2
|
93
|
10
|
6mo cortical organoids wt 6mo cortical organoids wt pan subtypes intermediate neurons Overall Top 100 Genes
|
6mo cortical organoids wt 6mo cortical organoids wt pan subtypes intermediate neurons Overall Top 100 Genes
|
|
1.978E-4
|
1.686E-2
|
1.275E-1
|
2.136E-1
|
2
|
98
|
11
|
PCBC EB blastocyst 100
|
Progenitor-Cell-Biology-Consortium EmbryoidBody fromBlastocyst-derived-humanEmbryonicStemCells top-relative-expression-ranked 100
|
PCBC
|
2.059E-4
|
1.686E-2
|
1.275E-1
|
2.224E-1
|
2
|
100
|
12
|
Human Kidney Cell Atlas/Human/Adult, Development, and Cancer types/Cell Type of Cell Class of Tissue/Kidney EN-U/Kidney Normal VHL RCC EN-U/Kidney Normal VHL RCC EN10
|
Human Kidney Cell Atlas/Human/Adult, Development, and Cancer types/Cell Type of Cell Class of Tissue/Kidney EN-U/Kidney Normal VHL RCC EN-U/Kidney Normal VHL RCC EN10
|
Adult, Development, and Cancer types
|
2.291E-4
|
1.686E-2
|
1.275E-1
|
2.474E-1
|
1
|
1
|
13
|
Arv SC-HD 500 K2
|
AravindRamakr StemCell-HD top-relative-expression-ranked 500 k-means-cluster#2
|
PCBC
|
3.320E-4
|
1.686E-2
|
1.275E-1
|
3.586E-1
|
2
|
127
|
14
|
6mo cortical organoids wt 6mo cortical organoids wt Subtype intermediate neurons s10 intermediate neurons Subtype intermediate neurons s10 Top 100 Genes
|
6mo cortical organoids wt 6mo cortical organoids wt Subtype intermediate neurons s10 intermediate neurons Subtype intermediate neurons s10 Top 100 Genes
|
|
3.695E-4
|
1.686E-2
|
1.275E-1
|
3.991E-1
|
2
|
134
|
15
|
6mo cortical organoids wt 6mo cortical organoids wt mature-like mature-like Subtype M.3.2 Top 100 Genes
|
6mo cortical organoids wt 6mo cortical organoids wt mature-like mature-like Subtype M.3.2 Top 100 Genes
|
|
3.919E-4
|
1.686E-2
|
1.275E-1
|
4.232E-1
|
2
|
138
|
16
|
Arv SC fibroblast 500 K3
|
AravindRamakr StemCell from inducedPluripotentialStemCells derived from from fibroblast top-relative-expression-ranked 500 k-means-cluster#3
|
PCBC
|
3.975E-4
|
1.686E-2
|
1.275E-1
|
4.293E-1
|
2
|
139
|
17
|
Sample Type by Project: Shred 1/TCGA-Bone and Soft Tissue/Sarcoma/Malignant Peripheral Nerve Sheath Tumors /1
|
Sample Type by Project: Shred 1/TCGA-Bone and Soft Tissue/Sarcoma/Malignant Peripheral Nerve Sheath Tumors /1
|
TCGA-Bone and Soft Tissue
|
4.207E-4
|
1.686E-2
|
1.275E-1
|
4.543E-1
|
2
|
143
|
18
|
Sample Type by Project: Shred 1/TCGA-Uterus/Uterine Carcinoma/Uterine Carcinosarcoma/4/3
|
Sample Type by Project: Shred 1/TCGA-Uterus/Uterine Carcinoma/Uterine Carcinosarcoma/4/3
|
TCGA-Uterus
|
4.385E-4
|
1.686E-2
|
1.275E-1
|
4.735E-1
|
2
|
146
|
19
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC hProg Top 40
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC hProg Top 40
|
GSE76381_EmbryoMoleculeCountsPMLog2
|
4.445E-4
|
1.686E-2
|
1.275E-1
|
4.800E-1
|
2
|
147
|
20
|
Sample Type by Project: Shred 1/TCGA-Thymus/Thymoma/Type B3/1/2
|
Sample Type by Project: Shred 1/TCGA-Thymus/Thymoma/Type B3/1/2
|
TCGA-Thymus
|
4.445E-4
|
1.686E-2
|
1.275E-1
|
4.800E-1
|
2
|
147
|
21
|
Human Kidney Cell Atlas/Human/Adult, Development, and Cancer types/Cell Type of Cell Class of Tissue/Kidney Normal cell/Kidney Normal-Medulla post-natal kidney Normal cell/Kidney Normal-Medulla post-natal kidney T0
|
Human Kidney Cell Atlas/Human/Adult, Development, and Cancer types/Cell Type of Cell Class of Tissue/Kidney Normal cell/Kidney Normal-Medulla post-natal kidney Normal cell/Kidney Normal-Medulla post-natal kidney T0
|
Adult, Development, and Cancer types
|
4.581E-4
|
1.686E-2
|
1.275E-1
|
4.947E-1
|
1
|
2
|
22
|
Sample Type by Project: Shred 1/TCGA-Kidney/Renal Cell Carcinoma/Kidney Clear Cell Renal Carcinoma/3/0
|
Sample Type by Project: Shred 1/TCGA-Kidney/Renal Cell Carcinoma/Kidney Clear Cell Renal Carcinoma/3/0
|
TCGA-Kidney
|
4.689E-4
|
1.686E-2
|
1.275E-1
|
5.064E-1
|
2
|
151
|
23
|
6mo cortical organoids wt 6mo cortical organoids wt Subtype intermediate neurons s9 intermediate neurons Subtype intermediate neurons s9 Top 100 Genes
|
6mo cortical organoids wt 6mo cortical organoids wt Subtype intermediate neurons s9 intermediate neurons Subtype intermediate neurons s9 Top 100 Genes
|
|
4.814E-4
|
1.686E-2
|
1.275E-1
|
5.199E-1
|
2
|
153
|
24
|
6mo cortical organoids wt 6mo cortical organoids wt Subtype intermediate neurons s1 intermediate neurons Subtype intermediate neurons s1 Top 100 Genes
|
6mo cortical organoids wt 6mo cortical organoids wt Subtype intermediate neurons s1 intermediate neurons Subtype intermediate neurons s1 Top 100 Genes
|
|
5.068E-4
|
1.686E-2
|
1.275E-1
|
5.473E-1
|
2
|
157
|
25
|
6mo cortical organoids wt 6mo cortical organoids wt Subtype intermediate neurons s11 intermediate neurons Subtype intermediate neurons s11 Top 100 Genes
|
6mo cortical organoids wt 6mo cortical organoids wt Subtype intermediate neurons s11 intermediate neurons Subtype intermediate neurons s11 Top 100 Genes
|
|
5.068E-4
|
1.686E-2
|
1.275E-1
|
5.473E-1
|
2
|
157
|
26
|
6mo cortical organoids wt 6mo cortical organoids wt Subtype intermediate neurons s12 intermediate neurons Subtype intermediate neurons s12 Top 100 Genes
|
6mo cortical organoids wt 6mo cortical organoids wt Subtype intermediate neurons s12 intermediate neurons Subtype intermediate neurons s12 Top 100 Genes
|
|
5.328E-4
|
1.686E-2
|
1.275E-1
|
5.754E-1
|
2
|
161
|
27
|
Arv SC-hpx blastocyst 500 K2
|
AravindRamakr StemCell-hypoxiaGrown fromBlastocyst-derived-humanEmbryonicStemCells top-relative-expression-ranked 500 k-means-cluster#2
|
PCBC
|
5.527E-4
|
1.686E-2
|
1.275E-1
|
5.970E-1
|
2
|
164
|
28
|
gudmap kidney e15.5 Podocyte MafB k1 500
|
kidney e15.5 Podocyte MafB k-means-cluster#1 top-relative-expression-ranked 500
|
Gudmap Mouse MOE430.2
|
5.731E-4
|
1.686E-2
|
1.275E-1
|
6.189E-1
|
2
|
167
|
29
|
6mo cortical organoids wt 6mo cortical organoids wt Subtype intermediate neurons s2 intermediate neurons Subtype intermediate neurons s2 Top 100 Genes
|
6mo cortical organoids wt 6mo cortical organoids wt Subtype intermediate neurons s2 intermediate neurons Subtype intermediate neurons s2 Top 100 Genes
|
|
5.799E-4
|
1.686E-2
|
1.275E-1
|
6.263E-1
|
2
|
168
|
30
|
6mo cortical organoids wt 6mo cortical organoids wt Subtype intermediate neurons s5 intermediate neurons Subtype intermediate neurons s5 Top 100 Genes
|
6mo cortical organoids wt 6mo cortical organoids wt Subtype intermediate neurons s5 intermediate neurons Subtype intermediate neurons s5 Top 100 Genes
|
|
5.937E-4
|
1.686E-2
|
1.275E-1
|
6.412E-1
|
2
|
170
|
31
|
6mo cortical organoids wt 6mo cortical organoids wt Subtype mature neuron 1 s4 mature neuron 1 Subtype mature neuron 1 s4 Top 100 Genes
|
6mo cortical organoids wt 6mo cortical organoids wt Subtype mature neuron 1 s4 mature neuron 1 Subtype mature neuron 1 s4 Top 100 Genes
|
|
6.219E-4
|
1.686E-2
|
1.275E-1
|
6.716E-1
|
2
|
174
|
32
|
Mouse Cell Atlas Mouse Regional GI Enterocytes Enterocyte Enterocyte Overall Top 200 Genes
|
Mouse Cell Atlas Mouse Regional GI Enterocytes Enterocyte Enterocyte Overall Top 200 Genes
|
Mouse Cell Atlas
|
6.219E-4
|
1.686E-2
|
1.275E-1
|
6.716E-1
|
2
|
174
|
33
|
6mo cortical organoids wt 6mo cortical organoids wt Subtype intermediate neurons s3 intermediate neurons Subtype intermediate neurons s3 Top 100 Genes
|
6mo cortical organoids wt 6mo cortical organoids wt Subtype intermediate neurons s3 intermediate neurons Subtype intermediate neurons s3 Top 100 Genes
|
|
6.290E-4
|
1.686E-2
|
1.275E-1
|
6.793E-1
|
2
|
175
|
34
|
Arv SC-H9hpx 500 K3
|
AravindRamakr StemCell-H9hpx top-relative-expression-ranked 500 k-means-cluster#3
|
PCBC
|
6.362E-4
|
1.686E-2
|
1.275E-1
|
6.871E-1
|
2
|
176
|
35
|
6mo cortical organoids wt 6mo cortical organoids wt Subtype mature neuron 1 s9 mature neuron 1 Subtype mature neuron 1 s9 Top 100 Genes
|
6mo cortical organoids wt 6mo cortical organoids wt Subtype mature neuron 1 s9 mature neuron 1 Subtype mature neuron 1 s9 Top 100 Genes
|
|
6.362E-4
|
1.686E-2
|
1.275E-1
|
6.871E-1
|
2
|
176
|
36
|
6mo cortical organoids wt 6mo cortical organoids wt Intermediate.1 Intermediate.1 Subtype int.01.7 Top 100 Genes
|
6mo cortical organoids wt 6mo cortical organoids wt Intermediate.1 Intermediate.1 Subtype int.01.7 Top 100 Genes
|
|
6.362E-4
|
1.686E-2
|
1.275E-1
|
6.871E-1
|
2
|
176
|
37
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC hRgl Top 40
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC hRgl Top 40
|
GSE76381_EmbryoMoleculeCountsPMLog2
|
6.506E-4
|
1.686E-2
|
1.275E-1
|
7.027E-1
|
2
|
178
|
38
|
6mo cortical organoids wt 6mo cortical organoids wt Subtype intermediate neurons s7 intermediate neurons Subtype intermediate neurons s7 Top 100 Genes
|
6mo cortical organoids wt 6mo cortical organoids wt Subtype intermediate neurons s7 intermediate neurons Subtype intermediate neurons s7 Top 100 Genes
|
|
6.800E-4
|
1.686E-2
|
1.275E-1
|
7.344E-1
|
2
|
182
|
39
|
6mo cortical organoids wt 6mo cortical organoids wt Subtype intermediate neurons s4 intermediate neurons Subtype intermediate neurons s4 Top 100 Genes
|
6mo cortical organoids wt 6mo cortical organoids wt Subtype intermediate neurons s4 intermediate neurons Subtype intermediate neurons s4 Top 100 Genes
|
|
6.875E-4
|
1.686E-2
|
1.275E-1
|
7.425E-1
|
2
|
183
|
40
|
6mo cortical organoids wt 6mo cortical organoids wt Subtype intermediate neurons s14 intermediate neurons Subtype intermediate neurons s14 Top 100 Genes
|
6mo cortical organoids wt 6mo cortical organoids wt Subtype intermediate neurons s14 intermediate neurons Subtype intermediate neurons s14 Top 100 Genes
|
|
6.875E-4
|
1.686E-2
|
1.275E-1
|
7.425E-1
|
2
|
183
|
41
|
Arv SC fibroblast 1000 K5
|
AravindRamakr StemCell from inducedPluripotentialStemCells derived from from fibroblast top-relative-expression-ranked 1000 k-means-cluster#5
|
PCBC
|
6.950E-4
|
1.686E-2
|
1.275E-1
|
7.506E-1
|
2
|
184
|
42
|
Arv SC-HD 1000 K3
|
AravindRamakr StemCell-HD top-relative-expression-ranked 1000 k-means-cluster#3
|
PCBC
|
6.950E-4
|
1.686E-2
|
1.275E-1
|
7.506E-1
|
2
|
184
|
43
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC hOPC Top 200
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC hOPC Top 200
|
GSE76381_EmbryoMoleculeCountsPMLog2
|
7.025E-4
|
1.686E-2
|
1.275E-1
|
7.587E-1
|
2
|
185
|
44
|
Glioblastoma Single Cell Merged Neoplastic Overall Top 200 Genes
|
Glioblastoma Single Cell Merged Neoplastic Overall Top 200 Genes
|
|
7.025E-4
|
1.686E-2
|
1.275E-1
|
7.587E-1
|
2
|
185
|
45
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC hOPC Overall Top 200 Genes
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC hOPC Overall Top 200 Genes
|
GSE76381_EmbryoMoleculeCountsPMLog2
|
7.025E-4
|
1.686E-2
|
1.275E-1
|
7.587E-1
|
2
|
185
|
46
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC hRgl Overall Top 200 Genes
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC hRgl Overall Top 200 Genes
|
GSE76381_EmbryoMoleculeCountsPMLog2
|
7.253E-4
|
1.702E-2
|
1.287E-1
|
7.834E-1
|
2
|
188
|
47
|
Lungmap Lungmap - Mouse FluidigmC1 Myeloid Myeloid Subtype macrophage-B PND07-28 Top 200 Genes
|
Lungmap Lungmap - Mouse FluidigmC1 Myeloid Myeloid Subtype macrophage-B PND07-28 Top 200 Genes
|
|
7.485E-4
|
1.702E-2
|
1.287E-1
|
8.084E-1
|
2
|
191
|
48
|
Lungmap Lungmap - Mouse FluidigmC1 Myeloid Myeloid Subtype macrophage-B Top 200 Genes
|
Lungmap Lungmap - Mouse FluidigmC1 Myeloid Myeloid Subtype macrophage-B Top 200 Genes
|
|
7.563E-4
|
1.702E-2
|
1.287E-1
|
8.168E-1
|
2
|
192
|
49
|
Lungmap Lungmap - Mouse FluidigmC1 Myeloid Myeloid Subtype macrophage-A Top 200 Genes
|
Lungmap Lungmap - Mouse FluidigmC1 Myeloid Myeloid Subtype macrophage-A Top 200 Genes
|
|
7.960E-4
|
1.738E-2
|
1.314E-1
|
8.596E-1
|
2
|
197
|
50
|
Lungmap Lungmap - Mouse FluidigmC1 Myeloid Myeloid Subtype macrophage-D Top 200 Genes
|
Lungmap Lungmap - Mouse FluidigmC1 Myeloid Myeloid Subtype macrophage-D Top 200 Genes
|
|
8.366E-4
|
1.738E-2
|
1.314E-1
|
9.035E-1
|
2
|
202
|