|
ID |
Name |
Source |
pValue |
FDR B&H |
FDR B&Y |
Bonferroni |
Genes from Input
|
Genes in Annotation
|
1
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC Unk Subtype UnkF Top 40 Genes
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC Unk Subtype UnkF Top 40 Genes
|
GSE76381_EmbryoMoleculeCountsPMLog2
|
2.068E-7
|
1.094E-4
|
7.493E-4
|
1.094E-4
|
3
|
61
|
2
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC Unk Overall Top 200 Genes
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC Unk Overall Top 200 Genes
|
GSE76381_EmbryoMoleculeCountsPMLog2
|
4.835E-6
|
8.423E-4
|
5.769E-3
|
2.558E-3
|
3
|
173
|
3
|
BrainMap BrainAtlas - Mouse McCarroll Neuron.excitatory.Slc17a6 Neuron.excitatory.Slc17a6 Overall Top 200 Genes
|
BrainMap BrainAtlas - Mouse McCarroll Neuron.excitatory.Slc17a6 Neuron.excitatory.Slc17a6 Overall Top 200 Genes
|
BrainMap
|
6.307E-6
|
8.423E-4
|
5.769E-3
|
3.337E-3
|
3
|
189
|
4
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC Unk Top 40
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC Unk Top 40
|
GSE76381_EmbryoMoleculeCountsPMLog2
|
7.143E-6
|
8.423E-4
|
5.769E-3
|
3.779E-3
|
3
|
197
|
5
|
BrainMap BrainAtlas - Mouse McCarroll Neuron.excitatory.Slc17a6 Neuron.excitatory.Slc17a6 Subtype Neuron.excitatory.Slc17a6.Rora Top 200 Genes
|
BrainMap BrainAtlas - Mouse McCarroll Neuron.excitatory.Slc17a6 Neuron.excitatory.Slc17a6 Subtype Neuron.excitatory.Slc17a6.Rora Top 200 Genes
|
BrainMap
|
1.530E-5
|
8.423E-4
|
5.769E-3
|
8.096E-3
|
3
|
254
|
6
|
BrainMap BrainAtlas - Mouse McCarroll Neuron.excitatory.Slc17a6 Neuron.excitatory.Slc17a6 Top 200
|
BrainMap BrainAtlas - Mouse McCarroll Neuron.excitatory.Slc17a6 Neuron.excitatory.Slc17a6 Top 200
|
BrainMap
|
1.530E-5
|
8.423E-4
|
5.769E-3
|
8.096E-3
|
3
|
254
|
7
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC Unk Subtype UnkG Top 200 Genes
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC Unk Subtype UnkG Top 200 Genes
|
GSE76381_EmbryoMoleculeCountsPMLog2
|
1.548E-5
|
8.423E-4
|
5.769E-3
|
8.191E-3
|
3
|
255
|
8
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC Unk Subtype UnkA Top 200 Genes
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC Unk Subtype UnkA Top 200 Genes
|
GSE76381_EmbryoMoleculeCountsPMLog2
|
2.071E-5
|
8.423E-4
|
5.769E-3
|
1.095E-2
|
3
|
281
|
9
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC Unk Overall Top 40 Genes
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC Unk Overall Top 40 Genes
|
GSE76381_EmbryoMoleculeCountsPMLog2
|
2.076E-5
|
8.423E-4
|
5.769E-3
|
1.098E-2
|
2
|
32
|
10
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC Unk Subtype UnkD Top 200 Genes
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC Unk Subtype UnkD Top 200 Genes
|
GSE76381_EmbryoMoleculeCountsPMLog2
|
2.183E-5
|
8.423E-4
|
5.769E-3
|
1.155E-2
|
3
|
286
|
11
|
BrainMap BrainAtlas - Mouse McCarroll Neuron Neuron Subtype Neuron.excitatory Top 200 Genes
|
BrainMap BrainAtlas - Mouse McCarroll Neuron Neuron Subtype Neuron.excitatory Top 200 Genes
|
BrainMap
|
2.543E-5
|
8.423E-4
|
5.769E-3
|
1.345E-2
|
3
|
301
|
12
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC hGaba Overall Top 40 Genes
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC hGaba Overall Top 40 Genes
|
GSE76381_EmbryoMoleculeCountsPMLog2
|
2.787E-5
|
8.423E-4
|
5.769E-3
|
1.474E-2
|
2
|
37
|
13
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC Unk Subtype UnkI Top 200 Genes
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC Unk Subtype UnkI Top 200 Genes
|
GSE76381_EmbryoMoleculeCountsPMLog2
|
2.804E-5
|
8.423E-4
|
5.769E-3
|
1.483E-2
|
3
|
311
|
14
|
BrainMap BrainAtlas - Mouse McCarroll Neuron.excitatory Neuron.excitatory Subtype Excitatory.subGroup1 Top 200 Genes
|
BrainMap BrainAtlas - Mouse McCarroll Neuron.excitatory Neuron.excitatory Subtype Excitatory.subGroup1 Top 200 Genes
|
BrainMap
|
2.831E-5
|
8.423E-4
|
5.769E-3
|
1.498E-2
|
3
|
312
|
15
|
Adult Brain Overview (690k cells, 9 regions, 565 cell clusters) BrainAtlas - Mouse McCarroll Neuron Subtype mixed excitatory.Gad1,Gad2 Top 200 Genes
|
Adult Brain Overview (690k cells, 9 regions, 565 cell clusters) BrainAtlas - Mouse McCarroll Neuron Subtype mixed excitatory.Gad1,Gad2 Top 200 Genes
|
|
2.858E-5
|
8.423E-4
|
5.769E-3
|
1.512E-2
|
3
|
313
|
16
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC Unk Subtype UnkF Top 200 Genes
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC Unk Subtype UnkF Top 200 Genes
|
GSE76381_EmbryoMoleculeCountsPMLog2
|
2.858E-5
|
8.423E-4
|
5.769E-3
|
1.512E-2
|
3
|
313
|
17
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC Unk Subtype UnkH Top 200 Genes
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC Unk Subtype UnkH Top 200 Genes
|
GSE76381_EmbryoMoleculeCountsPMLog2
|
3.025E-5
|
8.423E-4
|
5.769E-3
|
1.600E-2
|
3
|
319
|
18
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC Unk Subtype UnkC Top 200 Genes
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC Unk Subtype UnkC Top 200 Genes
|
GSE76381_EmbryoMoleculeCountsPMLog2
|
3.025E-5
|
8.423E-4
|
5.769E-3
|
1.600E-2
|
3
|
319
|
19
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC Unk Subtype UnkB Top 200 Genes
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC Unk Subtype UnkB Top 200 Genes
|
GSE76381_EmbryoMoleculeCountsPMLog2
|
3.025E-5
|
8.423E-4
|
5.769E-3
|
1.600E-2
|
3
|
319
|
20
|
BrainMap BrainAtlas - Mouse McCarroll Excitatory.subGroup4 Excitatory.subGroup4 Subtype Excitatory.subGroup4 PosteriorCortex Top 200 Genes
|
BrainMap BrainAtlas - Mouse McCarroll Excitatory.subGroup4 Excitatory.subGroup4 Subtype Excitatory.subGroup4 PosteriorCortex Top 200 Genes
|
BrainMap
|
3.258E-5
|
8.616E-4
|
5.901E-3
|
1.723E-2
|
3
|
327
|
21
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC hGaba Subtype hGaba Top 200 Genes
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC hGaba Subtype hGaba Top 200 Genes
|
GSE76381_EmbryoMoleculeCountsPMLog2
|
3.956E-5
|
9.952E-4
|
6.816E-3
|
2.093E-2
|
3
|
349
|
22
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC hGaba Subtype hNbGaba Top 200 Genes
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC hGaba Subtype hNbGaba Top 200 Genes
|
GSE76381_EmbryoMoleculeCountsPMLog2
|
4.163E-5
|
9.952E-4
|
6.816E-3
|
2.202E-2
|
3
|
355
|
23
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC Unk Subtype UnkG Top 40 Genes
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC Unk Subtype UnkG Top 40 Genes
|
GSE76381_EmbryoMoleculeCountsPMLog2
|
4.327E-5
|
9.952E-4
|
6.816E-3
|
2.289E-2
|
2
|
46
|
24
|
BrainMap BrainAtlas - Mouse McCarroll Mural.Rgs5.Acta2.Acta2,Rgs5 Mural.Rgs5.Acta2.Acta2,Rgs5 Subtype Mural.Rgs5.Acta2.Acta2,Rgs5 FrontalCortex Top 200 Genes
|
BrainMap BrainAtlas - Mouse McCarroll Mural.Rgs5.Acta2.Acta2,Rgs5 Mural.Rgs5.Acta2.Acta2,Rgs5 Subtype Mural.Rgs5.Acta2.Acta2,Rgs5 FrontalCortex Top 200 Genes
|
BrainMap
|
4.597E-5
|
1.013E-3
|
6.940E-3
|
2.432E-2
|
3
|
367
|
25
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC Unk Subtype UnkA Top 40 Genes
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC Unk Subtype UnkA Top 40 Genes
|
GSE76381_EmbryoMoleculeCountsPMLog2
|
5.119E-5
|
1.083E-3
|
7.419E-3
|
2.708E-2
|
2
|
50
|
26
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC Unk Subtype UnkD Top 40 Genes
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC Unk Subtype UnkD Top 40 Genes
|
GSE76381_EmbryoMoleculeCountsPMLog2
|
5.757E-5
|
1.171E-3
|
8.022E-3
|
3.045E-2
|
2
|
53
|
27
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC Unk Subtype UnkI Top 40 Genes
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC Unk Subtype UnkI Top 40 Genes
|
GSE76381_EmbryoMoleculeCountsPMLog2
|
5.978E-5
|
1.171E-3
|
8.022E-3
|
3.162E-2
|
2
|
54
|
28
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC Unk Subtype UnkH Top 40 Genes
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC Unk Subtype UnkH Top 40 Genes
|
GSE76381_EmbryoMoleculeCountsPMLog2
|
6.903E-5
|
1.304E-3
|
8.932E-3
|
3.652E-2
|
2
|
58
|
29
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC Unk Subtype UnkC Top 40 Genes
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC Unk Subtype UnkC Top 40 Genes
|
GSE76381_EmbryoMoleculeCountsPMLog2
|
7.390E-5
|
1.348E-3
|
9.233E-3
|
3.909E-2
|
2
|
60
|
30
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC hGaba Top 200
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC hGaba Top 200
|
GSE76381_EmbryoMoleculeCountsPMLog2
|
7.839E-5
|
1.382E-3
|
9.468E-3
|
4.147E-2
|
3
|
439
|
31
|
BM Top 100 - thalamus
|
BM Top 100 - thalamus
|
Body Map
|
8.152E-5
|
1.391E-3
|
9.528E-3
|
4.312E-2
|
2
|
63
|
32
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC Unk Subtype UnkB Top 40 Genes
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC Unk Subtype UnkB Top 40 Genes
|
GSE76381_EmbryoMoleculeCountsPMLog2
|
8.680E-5
|
1.435E-3
|
9.828E-3
|
4.592E-2
|
2
|
65
|
33
|
BM Top 100 - vestibular nuclei superior
|
BM Top 100 - vestibular nuclei superior
|
Body Map
|
9.787E-5
|
1.569E-3
|
1.075E-2
|
5.177E-2
|
2
|
69
|
34
|
BM Top 100 - midbrain
|
BM Top 100 - midbrain
|
Body Map
|
1.066E-4
|
1.610E-3
|
1.103E-2
|
5.639E-2
|
2
|
72
|
35
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC hGaba Subtype hNbGaba Top 40 Genes
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC hGaba Subtype hNbGaba Top 40 Genes
|
GSE76381_EmbryoMoleculeCountsPMLog2
|
1.066E-4
|
1.610E-3
|
1.103E-2
|
5.639E-2
|
2
|
72
|
36
|
BM Top 100 - cerebral cortex
|
BM Top 100 - cerebral cortex
|
Body Map
|
1.096E-4
|
1.610E-3
|
1.103E-2
|
5.797E-2
|
2
|
73
|
37
|
BM Top 100 - occipital lobe
|
BM Top 100 - occipital lobe
|
Body Map
|
1.126E-4
|
1.610E-3
|
1.103E-2
|
5.958E-2
|
2
|
74
|
38
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC hGaba Subtype hGaba Top 40 Genes
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC hGaba Subtype hGaba Top 40 Genes
|
GSE76381_EmbryoMoleculeCountsPMLog2
|
1.157E-4
|
1.611E-3
|
1.103E-2
|
6.121E-2
|
2
|
75
|
39
|
BM Top 100 - parietal lobe
|
BM Top 100 - parietal lobe
|
Body Map
|
1.188E-4
|
1.612E-3
|
1.104E-2
|
6.285E-2
|
2
|
76
|
40
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC hGaba Top 40
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC hGaba Top 40
|
GSE76381_EmbryoMoleculeCountsPMLog2
|
2.492E-4
|
3.295E-3
|
2.257E-2
|
1.318E-1
|
2
|
110
|
41
|
gudmap dev lower uro neuro e15.5 PelvicGanglion Sox10 k1 500
|
dev lower uro neuro e15.5 PelvicGanglion Sox10 k-means-cluster#1 top-relative-expression-ranked 500
|
Gudmap Mouse ST 1.0
|
3.216E-4
|
4.150E-3
|
2.842E-2
|
1.702E-1
|
2
|
125
|
42
|
Sample Type by Project: Shred 1/TCGA-Brain/Low Grade Glioma/Oligodendroglioma/5/2
|
Sample Type by Project: Shred 1/TCGA-Brain/Low Grade Glioma/Oligodendroglioma/5/2
|
TCGA-Brain
|
5.197E-4
|
5.895E-3
|
4.037E-2
|
2.749E-1
|
2
|
159
|
43
|
BrainMap BrainAtlas - Mouse McCarroll Excitatory.subGroup1 Excitatory.subGroup1 Top 200
|
BrainMap BrainAtlas - Mouse McCarroll Excitatory.subGroup1 Excitatory.subGroup1 Top 200
|
BrainMap
|
6.007E-4
|
5.895E-3
|
4.037E-2
|
3.178E-1
|
2
|
171
|
44
|
BrainMap BrainAtlas - Mouse McCarroll Excitatory.subGroup1 Excitatory.subGroup1 Overall Top 200 Genes
|
BrainMap BrainAtlas - Mouse McCarroll Excitatory.subGroup1 Excitatory.subGroup1 Overall Top 200 Genes
|
BrainMap
|
6.007E-4
|
5.895E-3
|
4.037E-2
|
3.178E-1
|
2
|
171
|
45
|
BrainMap/BrainAtlas - Mouse McCarroll/Lineage to Cells - regions (clevel sub)/Polydendrocyte/Polydendrocyte/Bmp4 C1q/Tnr/Cspg10
|
BrainMap/BrainAtlas - Mouse McCarroll/Lineage to Cells - regions (clevel sub)/Polydendrocyte/Polydendrocyte/Bmp4 C1q/Tnr/Cspg10
|
BrainMap
|
6.652E-4
|
5.895E-3
|
4.037E-2
|
3.519E-1
|
2
|
180
|
46
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC hGaba Overall Top 200 Genes
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC hGaba Overall Top 200 Genes
|
GSE76381_EmbryoMoleculeCountsPMLog2
|
6.800E-4
|
5.895E-3
|
4.037E-2
|
3.597E-1
|
2
|
182
|
47
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC hOMTN Overall Top 200 Genes
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC hOMTN Overall Top 200 Genes
|
GSE76381_EmbryoMoleculeCountsPMLog2
|
6.875E-4
|
5.895E-3
|
4.037E-2
|
3.637E-1
|
2
|
183
|
48
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC hOMTN Top 200
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC hOMTN Top 200
|
GSE76381_EmbryoMoleculeCountsPMLog2
|
6.875E-4
|
5.895E-3
|
4.037E-2
|
3.637E-1
|
2
|
183
|
49
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC hOPC Top 200
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC hOPC Top 200
|
GSE76381_EmbryoMoleculeCountsPMLog2
|
7.025E-4
|
5.895E-3
|
4.037E-2
|
3.716E-1
|
2
|
185
|
50
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC hOPC Overall Top 200 Genes
|
GSE7638 Midbrain human neurons vs stem cell-derived neurons Platform BrainMap - FluidigmC hOPC Overall Top 200 Genes
|
GSE76381_EmbryoMoleculeCountsPMLog2
|
7.025E-4
|
5.895E-3
|
4.037E-2
|
3.716E-1
|
2
|
185
|